RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FAM72BQ86X60 149 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 GALNT15Q8N3T1 639 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 SLC25A45Q8N413 288 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 TMIEQ8NEW7 156 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 JOSD2Q8TAC2 188 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 GRIN3AQ8TCU5 1115 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 HAPLN3Q96S86 360 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 PCDHB18PQ96TA0 734 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 C2orf49Q9BVC5 232 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-221ENST00000483778 METTL5Q9NRN9 209 aaKnown RBP18.42■□□□□ 0.54
ATG4B-221ENST00000483778 DMTF1Q9Y222 760 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
ATG4B-221ENST00000483778 TRIM38O00635 465 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 LEFTY1O75610 366 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 LSM8O95777 96 aaKnown RBP18.41■□□□□ 0.54
ATG4B-221ENST00000483778 CYP1A1P04798 512 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-221ENST00000483778 ACVRL1P37023 503 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 ARRB1P49407 418 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-221ENST00000483778 CLDN2P57739 230 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 POLR2FP61218 127 aaKnown RBP18.41■□□□□ 0.54
ATG4B-221ENST00000483778 ARF5P84085 180 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 FGL2Q14314 439 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 KRT31Q15323 416 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 CCDC14Q49A88 953 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 SLC45A4Q5BKX6 768 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 CDKAL1Q5VV42 579 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 SEL1L3Q68CR1 1132 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 C22orf39Q6P5X5 142 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 DRC7Q8IY82 874 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 DCAF4L2Q8NA75 395 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 TMEM145Q8NBT3 493 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 GPT2Q8TD30 523 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 RXFP2Q8WXD0 754 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 VOPP1Q96AW1 172 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 PREBQ9HCU5 417 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 NLRC4Q9NPP4 1024 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 UCKL1Q9NWZ5 548 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 WASF2Q9Y6W5 498 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 BAHCC1Q9P281 2608 aa18.41■□□□□ 0.54
ATG4B-221ENST00000483778 LRRK1Q38SD2 2015 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 ILVBLA1L0T0 632 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 PRAMEF26H0Y7S4 382 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 EEF1GP26641 437 aaKnown RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 GKP32189 559 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 JAM2P57087 298 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 PTP4A2Q12974 167 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 CDO1Q16878 200 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 INAVAQ3KP66 663 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 SETMARQ53H47 684 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 IQCHQ86VS3 1027 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 OR13H1Q8NG92 308 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 ENOX1Q8TC92 643 aaKnown RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 KLHDC7BQ96G42 594 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 CRELD1Q96HD1 420 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 FAM207AQ9NSI2 230 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 DKK4Q9UBT3 224 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 IL36AQ9UHA7 158 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 DACH1Q9UI36 760 aa18.4■□□□□ 0.54
ATG4B-221ENST00000483778 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 FCF1Q9Y324 198 aaKnown RBP18.4■□□□□ 0.54
ATG4B-221ENST00000483778 FASNP49327 2511 aaKnown RBP18.39■□□□□ 0.53
ATG4B-221ENST00000483778 PCDH8O95206 1070 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 MMP8P22894 467 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 ADRA1BP35368 520 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 DNA2P51530 1060 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 CDR2Q01850 454 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 GNA12Q03113 381 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 C6orf118Q5T5N4 469 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 MANEALQ5VSG8 457 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 KDM7AQ6ZMT4 941 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 LEKR1Q6ZMV7 388 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 ERN2Q76MJ5 926 aaKnown RBP18.39■□□□□ 0.53
ATG4B-221ENST00000483778 TMPRSS12Q86WS5 348 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 HORMAD1Q86X24 394 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 PDCD7Q8N8D1 485 aaKnown RBP18.39■□□□□ 0.53
ATG4B-221ENST00000483778 C11orf70Q9BRQ4 267 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 ATP13A1Q9HD20 1204 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 FANCLQ9NW38 375 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 FARP1Q9Y4F1 1045 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-221ENST00000483778 PCDHGA1Q9Y5H4 931 aa18.39■□□□□ 0.53
ATG4B-221ENST00000483778 LOC400499M0QZD8 3231 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 C2CD4BA6NLJ0 364 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 RAD51BO15315 384 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 SIGLEC6O43699 453 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 RFPL3O75679 317 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 PRNPP04156 253 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 THEGLP0DJG4 465 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 GIMD1P0DJR0 217 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 MYF5P13349 255 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 JUPP14923 745 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 SOX5P35711 763 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 NUDT1P36639 197 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 SERPINH1P50454 418 aaKnown RBP18.38■□□□□ 0.53
ATG4B-221ENST00000483778 TARDBPQ13148 414 aaKnown RBP eCLIP18.38■□□□□ 0.53
ATG4B-221ENST00000483778 COL9A2Q14055 689 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-221ENST00000483778 PROX2Q3B8N5 592 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 ZNF542PQ5EBM4 170 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 FBXL19Q6PCT2 694 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms