RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PPM1AP35813 382 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 SCTRP47872 440 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 LIMK2P53671 638 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 STRA8Q7Z7C7 330 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 LCA5Q86VQ0 697 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 ZNF354CQ86Y25 554 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 ISL2Q96A47 359 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 ZNF689Q96CS4 500 aaPredicted RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 HMCESQ96FZ2 354 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 MYRFLQ96LU7 910 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 CLSTN3Q9BQT9 956 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 TRIM56Q9BRZ2 755 aaKnown RBP12.12□□□□□ -0.47
SND1-210ENST00000483503 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 SLC13A1Q9BZW2 595 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 MAGEH1Q9H213 219 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 CCSER2Q9H7U1 834 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
SND1-210ENST00000483503 NDFIP2Q9NV92 336 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 UBP1Q9NZI7 540 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
SND1-210ENST00000483503 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 HEATR9A2RTY3 570 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 HMX2A2RU54 273 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 ADAM12O43184 909 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
SND1-210ENST00000483503 CNTN5O94779 1100 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 LATS1O95835 1130 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 DNAJB1P25685 340 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 TYK2P29597 1187 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 OR1E1P30953 314 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 EPHB3P54753 998 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CDH4P55283 916 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CDK18Q07002 472 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 PLD1Q13393 1074 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 SERINC3Q13530 473 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 RAB33AQ14088 237 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
SND1-210ENST00000483503 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 ALFQ53S48 1182 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 SPDYAQ5MJ70 313 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CES3Q6UWW8 571 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 RANBP10Q6VN20 620 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 NLRP9Q7RTR0 991 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 DDX53Q86TM3 631 aaKnown RBP12.11□□□□□ -0.47
SND1-210ENST00000483503 UNC5BQ8IZJ1 945 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 SPATA22Q8NHS9 363 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
SND1-210ENST00000483503 TSNARE1Q96NA8 513 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 RANBP9Q96S59 729 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 APOL2Q9BQE5 337 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 FAM167BQ9BTA0 163 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 NT5MQ9NPB1 228 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CHRAC1Q9NRG0 131 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 TCAF1Q9Y4C2 921 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 YIPF1Q9Y548 306 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
SND1-210ENST00000483503 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 C2CD2LO14523 706 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 TPP1O14773 563 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 PRAMEF11O60813 436 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 PMPCBO75439 489 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 CLDN11O75508 207 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 PAPSS2O95340 614 aaPredicted RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 PEX11BO96011 259 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 MT-CYBP00156 380 aaPredicted RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 TIMP1P01033 207 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 ALDOAP04075 364 aaKnown RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 BPGMP07738 259 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 TPH1P17752 444 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 ETFBP38117 255 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 MAGEA12P43365 314 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 WNT3AP56704 352 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 ITKQ08881 620 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 OLIG2Q13516 323 aa12.1□□□□□ -0.47
SND1-210ENST00000483503 THOC5Q13769 683 aaKnown RBP12.1□□□□□ -0.47
SND1-210ENST00000483503 ZNF235Q14590 738 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms