RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 OR6K2Q8NGY2 324 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 FRS2Q8WU20 508 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 PTPRN2Q92932 1015 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 HDAC11Q96DB2 347 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 OSBPL9Q96SU4 736 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 NAPGQ99747 312 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-224ENST00000483359 SLC6A17Q9H1V8 727 aa18.16■□□□□ 0.5
CPNE1-224ENST00000483359 KCNK1O00180 336 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PPP1R12AO14974 1030 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 FGGP02679 453 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CXCL12P48061 93 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PXNP49023 591 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 NR2C2P49116 596 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CLCN6P51797 869 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SLC10A7Q0GE19 358 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PDK1Q15118 436 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 ANO7Q6IWH7 933 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 KDM1BQ8NB78 822 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 DTWD2Q8NBA8 298 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 COG1Q8WTW3 980 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 MS4A14Q96JA4 679 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 C10orf88Q9H8K7 445 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SEPT10Q9P0V9 454 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SNX12Q9UMY4 172 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 R3HDM2Q9Y2K5 976 aaKnown RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CKAP5Q14008 2032 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 EDDM13A0A1B0GTR0 161 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CTAGE9A4FU28 777 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 ZNF185O15231 689 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 ZNF821O75541 412 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PEX11BO96011 259 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CCR3P51677 355 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 RHOAP61586 193 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SLC20A2Q08357 652 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PPIDQ08752 370 aaKnown RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 NOMO1Q15155 1222 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 TMCO4Q5TGY1 634 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SYT10Q6XYQ8 523 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CCDC13Q8IYE1 715 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 TSTD1Q8NFU3 115 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 HMGB4Q8WW32 186 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 LRFN3Q9BTN0 628 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CINPQ9BW66 212 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-224ENST00000483359 CEP41Q9BYV8 373 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 PRSS16Q9NQE7 514 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 SMARCAL1Q9NZC9 954 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
CPNE1-224ENST00000483359 LAMTOR5O43504 91 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF235Q14590 738 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 LBRQ14739 615 aaKnown RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 CYTH1Q15438 398 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 C9orf64Q5T6V5 341 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 TIGD7Q6NT04 549 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 BZW1Q7L1Q6 419 aaKnown RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 C1orf210Q8IVY1 113 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 STK40Q8N2I9 435 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 RYBPQ8N488 228 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 TSEN2Q8NCE0 465 aaKnown RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 NSMCE1Q8WV22 266 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 ATG4AQ8WYN0 398 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 ZNF419Q96HQ0 510 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 IER2Q9BTL4 223 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 POLMQ9NP87 494 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-224ENST00000483359 SUN2Q9UH99 717 aa18.14■□□□□ 0.49
CPNE1-224ENST00000483359 H7C0C1 242 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 CCNCP24863 283 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 ATP5OP48047 213 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 DGKEP52429 567 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 ETF1P62495 437 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 LONRF2Q1L5Z9 754 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 INO80DQ53TQ3 878 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 NYAP1Q6ZVC0 841 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 LRRC49Q8IUZ0 686 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 TFB1MQ8WVM0 346 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 CEP44Q9C0F1 390 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 MKRN2Q9H000 416 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.495e-7■■■□□ 17.8
CPNE1-224ENST00000483359 MCF2LO15068 1137 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 MUSKO15146 869 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 GJB3O75712 270 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 RECQLP46063 649 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 VASPP50552 380 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 EIF3EP60228 445 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 MAXP61244 160 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 CAMK2GQ13555 558 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 MARC1Q5VT66 337 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 HEATR6Q6AI08 1181 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 DPY19L3Q6ZPD9 716 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 PGBD3Q8N328 593 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 PCDH20Q8N6Y1 951 aaKnown RBP18.13■□□□□ 0.49
CPNE1-224ENST00000483359 CHST14Q8NCH0 376 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 MDGA1Q8NFP4 955 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 OR2A12Q8NGT7 310 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 GRIN3AQ8TCU5 1115 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 PBKQ96KB5 322 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 CD248Q9HCU0 757 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 LHX3Q9UBR4 397 aa18.13■□□□□ 0.49
CPNE1-224ENST00000483359 TTC24A2A3L6 582 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms