RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 MAT2AP31153 395 aaKnown RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 CHRNA3P32297 505 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 NNMTP40261 264 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 PRKCIP41743 596 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 GRIA4P48058 902 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 SERPINH1P50454 418 aaKnown RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 AFF3P51826 1226 aaKnown RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 SIM1P81133 766 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 IL9RQ01113 521 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 SCAPQ12770 1279 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 MAMLD1Q13495 774 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 DNAJC24Q6P3W2 148 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 NAXDQ8IW45 347 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 PNPLA1Q8N8W4 532 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 C2orf49Q9BVC5 232 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 NAT10Q9H0A0 1025 aaKnown RBP12.34□□□□□ -0.43
HDLBP-239ENST00000483086 ATP13A1Q9HD20 1204 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 TM7SF3Q9NS93 570 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 PCOLCE2Q9UKZ9 415 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 FZD10Q9ULW2 581 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 CHD6Q8TD26 2715 aa12.34□□□□□ -0.43
HDLBP-239ENST00000483086 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
HDLBP-239ENST00000483086 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-239ENST00000483086 C1QTNF9BB2RNN3 333 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 ALOX15BO15296 676 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 SPINT1O43278 529 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 RHOQP17081 205 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 CCR5P51681 352 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 KRT83P78385 493 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 FANCCQ00597 558 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 SLC14A1Q13336 389 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 ZNF423Q2M1K9 1284 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 PLEKHA7Q6IQ23 1121 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 RWDD4Q6NW29 188 aaKnown RBP12.33□□□□□ -0.44
HDLBP-239ENST00000483086 KDM7AQ6ZMT4 941 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 SLCO6A1Q86UG4 719 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 SPATS2Q86XZ4 545 aaKnown RBP12.33□□□□□ -0.44
HDLBP-239ENST00000483086 OR6K2Q8NGY2 324 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 GRIN3AQ8TCU5 1115 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 KLK6Q92876 244 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 KLK13Q9UKR3 277 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
HDLBP-239ENST00000483086 MYLKQ15746 1914 aa12.33□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-239ENST00000483086 LRRC72A6NJI9 287 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 VILLO15195 856 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 LEFTY1O75610 366 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TCF4P15884 667 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 CLCN6P51797 869 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 RACK1P63244 317 aaKnown RBP12.32□□□□□ -0.44
HDLBP-239ENST00000483086 FGL2Q14314 439 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 ASIC2Q16515 512 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 SCYL2Q6P3W7 929 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 ZNF783Q6ZMS7 281 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 SLFN11Q7Z7L1 901 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-239ENST00000483086 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 TM6SF2Q9BZW4 377 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 ITPR1Q14643 2758 aa12.32□□□□□ -0.44
HDLBP-239ENST00000483086 LOC400499M0QZD8 3231 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 TMEM191CA6NGB0 347 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 KPNA3O00505 521 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 SLC7A4O43246 635 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 CER1O95813 267 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 ZNF883P0CG24 379 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 PRLRP16471 622 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 L1CAMP32004 1257 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 ABL2P42684 1182 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 MAPKAPK2P49137 400 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 CCNHP51946 323 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 TRIP6Q15654 476 aaKnown RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 ACBD5Q5T8D3 534 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 SEL1L3Q68CR1 1132 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 PARS2Q7L3T8 475 aaKnown RBP12.31□□□□□ -0.44
HDLBP-239ENST00000483086 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
HDLBP-239ENST00000483086 TRIM69Q86WT6 500 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms