RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KPNA3O00505 521 aaPredicted RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 TBC1D3HP0C7X1 549 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 CEACAM1P13688 526 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 GRIA4P48058 902 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 CSNK1EP49674 416 aaKnown RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 DNA2P51530 1060 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 RACK1P63244 317 aaKnown RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 CNTN1Q12860 1018 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 SEMA3BQ13214 749 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 SLC14A1Q13336 389 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 POM121L1PQ3SYA9 428 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 HGSNATQ68CP4 663 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 TBC1D3GQ6DHY5 549 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 TBC1D3CQ6IPX1 549 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 ZNF354CQ86Y25 554 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 DNAAF5Q86Y56 855 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 TBC1D3Q8IZP1 549 aaPredicted RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 RTL3Q8N8U3 475 aaKnown RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 DEFB124Q8NES8 71 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 TMIEQ8NEW7 156 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 SKA1Q96BD8 255 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
VARS-225ENST00000482996 ISCUQ9H1K1 167 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 TNKS2Q9H2K2 1166 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 NDFIP2Q9NV92 336 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 MYO1AQ9UBC5 1043 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 NEU3Q9UQ49 428 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
VARS-225ENST00000482996 ZSCAN5CA6NGD5 496 aaPredicted RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 PLK4O00444 970 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 FGF10O15520 208 aaPredicted RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 PLRG1O43660 514 aaKnown RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 GYPCP04921 128 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 NUDT1P36639 197 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 METAP1P53582 386 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 YBEYP58557 167 aaPredicted RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 TPI1P60174 286 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 ARF5P84085 180 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 CARD16Q5EG05 197 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 N4BP2L1Q5TBK1 243 aaPredicted RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 DPY19L3Q6ZPD9 716 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 PRPF39Q86UA1 669 aaKnown RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 CHST14Q8NCH0 376 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 FAM131CQ96AQ9 280 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 ISG20Q96AZ6 181 aaKnown RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 PPP1R16AQ96I34 528 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 GAREM1Q9H706 876 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 IL36AQ9UHA7 158 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 AP4E1Q9UPM8 1137 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 FCF1Q9Y324 198 aaKnown RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 SLCO1B1Q9Y6L6 691 aa14.16□□□□□ -0.14
VARS-225ENST00000482996 NYNRINQ9P2P1 1898 aaKnown RBP14.16□□□□□ -0.14
VARS-225ENST00000482996 PCNX2A6NKB5 2137 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 CABIN1Q9Y6J0 2220 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 WASH4PA8MWX3 477 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 GIPC1O14908 333 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 KDELR3O43731 214 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 GJB3O75712 270 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 CTSLP07711 333 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ZNF883P0CG24 379 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 C21orf59P57076 290 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 BNC1Q01954 994 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 HNRNPDQ14103 355 aaKnown RBP14.15□□□□□ -0.14
VARS-225ENST00000482996 TRIM14Q14142 442 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 KIF19Q2TAC6 998 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 HLA-BQ31612 363 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 PARP15Q460N3 678 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 SLC45A4Q5BKX6 768 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ARSIQ5FYB1 569 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ERMARDQ5T6L9 678 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 AGBL4Q5VU57 503 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 PIP4P1Q86T03 277 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 PLPP6Q8IY26 295 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 RYBPQ8N488 228 aaPredicted RBP14.15□□□□□ -0.14
VARS-225ENST00000482996 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 SLC6A18Q96N87 628 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 HEPHQ9BQS7 1158 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ORAI3Q9BRQ5 295 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 TRIM7Q9C029 511 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 DHX35Q9H5Z1 703 aaKnown RBP14.15□□□□□ -0.14
VARS-225ENST00000482996 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 AASDHPPTQ9NRN7 309 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 GPATCH2LQ9NWQ4 482 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 PCSK1NQ9UHG2 260 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ANKRD6Q9Y2G4 727 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 CEP295Q9C0D2 2601 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 ACACBO00763 2458 aa14.15□□□□□ -0.14
VARS-225ENST00000482996 RASA4BC9J798 803 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 EEF2KO00418 725 aaKnown RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 DAPK3O43293 454 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 RASA4O43374 803 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 LATO43561 262 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 BUB1O43683 1085 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 ZNF821O75541 412 aaPredicted RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 LEFTY1O75610 366 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 GSRP00390 522 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 TPM1P09493 284 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms