RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 RNF11Q9Y3C5 154 aa18.36■□□□□ 0.53
SSR4-209ENST00000482902 ZNF711Q9Y462 761 aa18.36■□□□□ 0.53
SSR4-209ENST00000482902 CLDN5O00501 218 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 ADCY6O43306 1168 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 MX2P20592 715 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 NOS2P35228 1153 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 STT3AP46977 705 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 PAFAH1B3Q15102 231 aaKnown RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 FSCBQ5H9T9 825 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 DCLK2Q8N568 766 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 B3GALNT2Q8NCR0 500 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 RSPH1Q8WYR4 309 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 ATXN7L3BQ96GX2 97 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 TNIP3Q96KP6 325 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 ZNF512Q96ME7 567 aaPredicted RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 AGAP3Q96P47 875 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 NPY6RQ99463 290 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 DUSP16Q9BY84 665 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 DNAI2Q9GZS0 605 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 MYO18AQ92614 2054 aaKnown RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 HUS1O60921 280 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 USP12O75317 370 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 NDUFV1P49821 464 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 NUDT2P50583 147 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 GTF2A2P52657 109 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 CCNA1P78396 465 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 DPYSQ14117 519 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 DGKDQ16760 1214 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 ZNF423Q2M1K9 1284 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 SYPL2Q5VXT5 272 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 LPCAT2Q7L5N7 544 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 OSTM1Q86WC4 334 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 SLC35B4Q969S0 331 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 ZNF669Q96BR6 464 aaPredicted RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 LENG8Q96PV6 779 aaPredicted RBP18.35■□□□□ 0.53
SSR4-209ENST00000482902 HAUS8Q9BT25 410 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 PLGRKTQ9HBL7 147 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 STAP1Q9ULZ2 295 aa18.35■□□□□ 0.53
SSR4-209ENST00000482902 KANSL1LA0AUZ9 987 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 KLHL41O60662 606 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 BEST1O76090 585 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 F7P08709 466 aaPredicted RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 DARSP14868 501 aaKnown RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 GJA5P36382 358 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PNPLA4P41247 253 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 ANKRD23Q86SG2 305 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 NT5C3BQ969T7 300 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 CCT7Q99832 543 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 MAN1C1Q9NR34 630 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 RRN3P2A6NIE6 340 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 AIM2O14862 343 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 DCLK1O15075 740 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PORP16435 677 aaPredicted RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 PSMC3P17980 439 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 FUT4P22083 530 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 NUMBP49757 651 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 ENTPD1P49961 510 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 CYTH1Q15438 398 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 CCDC153Q494R4 210 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 DUSP28Q4G0W2 176 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PIGGQ5H8A4 983 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 NCCRP1Q6ZVX7 275 aaPredicted RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 BNIPLQ7Z465 357 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 STRA8Q7Z7C7 330 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 TNS4Q8IZW8 715 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PLD6Q8N2A8 252 aaKnown RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 LZTR1Q8N653 840 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 TMEM102Q8N9M5 508 aaPredicted RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 SERPINI1Q99574 410 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 RBBP8Q99708 897 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 HNRNPABQ99729 332 aaKnown RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 SLX1AQ9BQ83 275 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PIGVQ9NUD9 493 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PIN4Q9Y237 131 aaKnown RBP18.34■□□□□ 0.53
SSR4-209ENST00000482902 RALGAPA2Q2PPJ7 1873 aa18.34■□□□□ 0.53
SSR4-209ENST00000482902 PTPN3P26045 913 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 SPRP35270 261 aaPredicted RBP18.33■□□□□ 0.53
SSR4-209ENST00000482902 MSX2P35548 267 aaPredicted RBP18.33■□□□□ 0.53
SSR4-209ENST00000482902 SV2CQ496J9 727 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 SLC9B1Q4ZJI4 515 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 EPGNQ6UW88 154 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 LIMS2Q7Z4I7 341 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.33■□□□□ 0.53
SSR4-209ENST00000482902 WNT8BQ93098 351 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 COG4Q9H9E3 785 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 RRN3Q9NYV6 651 aa18.33■□□□□ 0.53
SSR4-209ENST00000482902 FAM72CH0Y354 149 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 HOXD8P13378 290 aaPredicted RBP18.33■□□□□ 0.52
SSR4-209ENST00000482902 NPR3P17342 541 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 MS4A2Q01362 244 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 FAM72AQ5TYM5 149 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 FAM72DQ6L9T8 149 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 ELMSAN1Q6PJG2 1045 aa18.33■□□□□ 0.52
SSR4-209ENST00000482902 BNC2Q6ZN30 1099 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms