RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 KIAA1614Q5VZ46 1190 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
TMEM54-206ENST00000482771 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
TMEM54-206ENST00000482771 SNRNP27Q8WVK2 155 aaKnown RBP13.12□□□□□ -0.31
TMEM54-206ENST00000482771 MED8Q96G25 268 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 CEP63Q96MT8 703 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 HDAC8Q9BY41 377 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 CLMPQ9H6B4 373 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
TMEM54-206ENST00000482771 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 HS3ST4Q9Y661 456 aa13.12□□□□□ -0.31
TMEM54-206ENST00000482771 A6NNZ2 444 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 PSMA7O14818 248 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 ENDOD1O94919 500 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 PRNPP04156 253 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 CDH4P55283 916 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 TMEM259Q4ZIN3 620 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 EFHC1Q5JVL4 640 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 LINGO4Q6UY18 593 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 EFL1Q7Z2Z2 1120 aaKnown RBP13.11□□□□□ -0.31
TMEM54-206ENST00000482771 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
TMEM54-206ENST00000482771 WDTC1Q8N5D0 677 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
TMEM54-206ENST00000482771 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 SLC2A13Q96QE2 648 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 PSMB7Q99436 277 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 IL36AQ9UHA7 158 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 KLF15Q9UIH9 416 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 ENTPD2Q9Y5L3 495 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 TRPM6Q9BX84 2022 aa13.11□□□□□ -0.31
TMEM54-206ENST00000482771 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 RP1P56715 2156 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 SPTY2D1-AS1A0A0U1RR47 76 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 K7ENP7 123 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 RAD51BO15315 384 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CSF2P04141 144 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 RHOCP08134 193 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 GLI1P08151 1106 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 GNA15P30679 374 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 RPS21P63220 83 aaKnown RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 MTA1Q13330 715 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 PDCLQ13371 301 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 STIM1Q13586 685 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 FGL2Q14314 439 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 MEA1Q16626 185 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 DEFB133Q30KQ1 61 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 ALFQ53S48 1182 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 ZCCHC8Q6NZY4 707 aaKnown RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 GUSBP11Q6P575 273 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 INO80CQ6PI98 192 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CRTC1Q6UUV9 634 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 GRIN3AQ8TCU5 1115 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 LMX1AQ8TE12 382 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 PRR11Q96HE9 360 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CPXM1Q96SM3 734 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
TMEM54-206ENST00000482771 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
TMEM54-206ENST00000482771 KIF26BQ2KJY2 2108 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 M0QYT0 321 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 ARHGAP6O43182 974 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 AQP9O43315 295 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SLC28A2O43868 658 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 HSF2BPO75031 334 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 LEFTY1O75610 366 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 TNFSF15O95150 251 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 WISP1O95388 367 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 ADCY5O95622 1261 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
TMEM54-206ENST00000482771 JUNDP17535 347 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 USP8P40818 1118 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
TMEM54-206ENST00000482771 DNA2P51530 1060 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SKOR1P84550 965 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 SGCGQ13326 291 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 KLHL10Q6JEL2 608 aa13.09□□□□□ -0.31
TMEM54-206ENST00000482771 CCDC81Q6ZN84 652 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms