RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ZC3H18Q86VM9 953 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 MNS1Q8NEH6 495 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 C1orf54Q8WWF1 131 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 LGMNQ99538 433 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 SPATA6Q9NWH7 488 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 C2orf42Q9NWW7 574 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 DLGAP2Q9P1A6 1054 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 UBA2Q9UBT2 640 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 MMP17Q9ULZ9 603 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 SLC8A2Q9UPR5 921 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 HS3ST2Q9Y278 367 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 CTAGE15A4D2H0 777 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 DLL1O00548 723 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 NPC1O15118 1278 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 MAFKO60675 156 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 CTAGE8P0CG41 777 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 VAV1P15498 845 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 NR2C2P49116 596 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 GEMIN4P57678 1058 aaKnown RBP20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 IL10RBQ08334 325 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 AP1B1Q10567 949 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 PDK1Q15118 436 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 DLG2Q15700 870 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 BMP8AQ7Z5Y6 402 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 CTAGE6Q86UF2 777 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 CTAGE4Q8IX94 777 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 SPATA4Q8NEY3 305 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 ACTL9Q8TC94 416 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 TNKS2Q9H2K2 1166 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 TMEM245Q9H330 911 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 PDFQ9HBH1 243 aa20.29■□□□□ 0.84
TRAPPC12-220ENST00000482645 PPP1R12AO14974 1030 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 SYNCRIPO60506 623 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 TMCC1O94876 653 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 CD160O95971 181 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 SLC20A2Q08357 652 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 SNX1Q13596 522 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 STARD3Q14849 445 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 HSF5Q4G112 596 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 Q6ZVU0 165 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 BZW1Q7L1Q6 419 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 KLHL7Q8IXQ5 586 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 TTC13Q8NBP0 860 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 LRRN4CLQ8ND94 238 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 NSMCE1Q8WV22 266 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 OLFM3Q96PB7 478 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 TM6SF2Q9BZW4 377 aa20.28■□□□□ 0.84
TRAPPC12-220ENST00000482645 CHURC1-FNTBB4DL54 471 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 RIOK3O14730 519 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 PHF2O75151 1096 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 MAGEA9P43362 315 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 TMEM31Q5JXX7 168 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 KIAA1211LQ6NV74 962 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 C22orf39Q6P5X5 142 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 LRRC49Q8IUZ0 686 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 SPEM1Q8N4L4 309 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 HDAC11Q96DB2 347 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 GABRG3Q99928 467 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 SEPT10Q9P0V9 454 aa20.27■□□□□ 0.84
TRAPPC12-220ENST00000482645 H7C0C1 242 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 MCF2LO15068 1137 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 ATP9BO43861 1147 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 COL9A1P20849 921 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 ATP5OP48047 213 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 CLCN6P51797 869 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 SATB1Q01826 763 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 ENPP2Q13822 863 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 NOMO1Q15155 1222 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 CRY1Q16526 586 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 HNRNPA1L2Q32P51 320 aaKnown RBP20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 TIGD7Q6NT04 549 aaPredicted RBP20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 TMEM92Q6UXU6 159 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 SYT13Q7L8C5 426 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 CACUL1Q86Y37 369 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCDC13Q8IYE1 715 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 KDM1BQ8NB78 822 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 FRS2Q8WU20 508 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 EXOC2Q96KP1 924 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 HHIPQ96QV1 700 aa20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 CINPQ9BW66 212 aaPredicted RBP20.27■□□□□ 0.83
TRAPPC12-220ENST00000482645 EDDM13A0A1B0GTR0 161 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 PRR33A8MZF0 331 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 CCDC188H7C350 402 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 KCNK1O00180 336 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 LIASO43766 372 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 GPR37L1O60883 481 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 SIN3BO75182 1162 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 AVPR2P30518 371 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 EIF3EP60228 445 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 RHOAP61586 193 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 PPIDQ08752 370 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 SLC10A7Q0GE19 358 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 LBRQ14739 615 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 FAM182AQ5T1J6 154 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 TMCO4Q5TGY1 634 aa20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 RYBPQ8N488 228 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 C12orf50Q8NA57 414 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC12-220ENST00000482645 TFB1MQ8WVM0 346 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms