RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 PCDH20Q8N6Y1 951 aaKnown RBP20.46■□□□□ 0.87
CLIP2-205ENST00000482424 SNRNP25Q9BV90 132 aaKnown RBP20.46■□□□□ 0.87
CLIP2-205ENST00000482424 ZDHHC5Q9C0B5 715 aa20.46■□□□□ 0.87
CLIP2-205ENST00000482424 PCSK1NQ9UHG2 260 aa20.46■□□□□ 0.87
CLIP2-205ENST00000482424 SLCO1B1Q9Y6L6 691 aa20.46■□□□□ 0.87
CLIP2-205ENST00000482424 FSBPO95073 299 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 CCR5P51681 352 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 GEMIN4P57678 1058 aaKnown RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 CA9Q16790 459 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 ASTE1Q2TB18 679 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 CCDC122Q5T0U0 273 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 DPY19L3Q6ZPD9 716 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 CHST14Q8NCH0 376 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 TNKS2Q9H2K2 1166 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 DHX35Q9H5Z1 703 aaKnown RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 DNAAF2Q9NVR5 837 aaKnown RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 GPATCH2LQ9NWQ4 482 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 DONSONQ9NYP3 566 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 TPX2Q9ULW0 747 aaKnown RBP20.45■□□□□ 0.86
CLIP2-205ENST00000482424 HPCAL4Q9UM19 191 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 ACTL7AQ9Y615 435 aa20.45■□□□□ 0.86
CLIP2-205ENST00000482424 ASCC3Q8N3C0 2202 aaKnown RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 ZSCAN5CA6NGD5 496 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 PLRG1O43660 514 aaKnown RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 BNIP3LO60238 219 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 PRPSAP2O60256 369 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 PRNPP04156 253 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 EIF4A3P38919 411 aaKnown RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 MAPK8P45983 427 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 TPI1P60174 286 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 PIGHQ14442 188 aaPredicted RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 PARP15Q460N3 678 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 CARD16Q5EG05 197 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 AGBL4Q5VU57 503 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 MINDY1Q8N5J2 469 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 NIPA2Q8N8Q9 360 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 OR14C36Q8NHC7 312 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 SNX19Q92543 992 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 EBF2Q9HAK2 575 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 TM9SF3Q9HD45 589 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 IL36AQ9UHA7 158 aa20.44■□□□□ 0.86
CLIP2-205ENST00000482424 FCF1Q9Y324 198 aaKnown RBP20.44■□□□□ 0.86
CLIP2-205ENST00000482424 A0A1W2PPC4 97 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 SSU72P8A0A1W2PR75 194 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 MED19A0JLT2 244 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 FAM47DPA6NHR8 397 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 UPK3BL1B0FP48 263 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 UPK3BL2E5RIL1 263 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 RNF103O00237 685 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 GJB3O75712 270 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 RECQLP46063 649 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 HCAR3P49019 387 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 AFF3P51826 1226 aaKnown RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 ZNF135P52742 658 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 ATXN3P54252 364 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 BNC1Q01954 994 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 CNTN1Q12860 1018 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 GRIK2Q13002 908 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 SLC18A3Q16572 532 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 PPM1JQ5JR12 505 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 SARM1Q6SZW1 724 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 ARHGEF26Q96DR7 871 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 KCTD15Q96SI1 283 aaPredicted RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 GTPBP2Q9BX10 602 aaKnown RBP20.43■□□□□ 0.86
CLIP2-205ENST00000482424 LRRC19Q9H756 370 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 ABHD10Q9NUJ1 306 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 WASF2Q9Y6W5 498 aa20.43■□□□□ 0.86
CLIP2-205ENST00000482424 RASA4BC9J798 803 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 EEF2KO00418 725 aaKnown RBP20.42■□□□□ 0.86
CLIP2-205ENST00000482424 PLK4O00444 970 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 RASA4O43374 803 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 LATO43561 262 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 MFAP3LO75121 409 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 CSRP1P21291 193 aaKnown RBP20.42■□□□□ 0.86
CLIP2-205ENST00000482424 IL1R2P27930 398 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 GRIA4P48058 902 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 NDST2P52849 883 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 TAS2R38P59533 333 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 SERINC3Q13530 473 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 INO80DQ53TQ3 878 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-205ENST00000482424 ARSIQ5FYB1 569 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 PIP5KL1Q5T9C9 394 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 CASKIN2Q8WXE0 1202 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 VOPP1Q96AW1 172 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 ARRDC3Q96B67 414 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 HMCESQ96FZ2 354 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 HEPHQ9BQS7 1158 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 NUP85Q9BW27 656 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 KLC2Q9H0B6 622 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 IP6K2Q9UHH9 426 aa20.42■□□□□ 0.86
CLIP2-205ENST00000482424 PLXNA2O75051 1894 aa20.41■□□□□ 0.86
CLIP2-205ENST00000482424 CNOT1A5YKK6 2376 aaKnown RBP20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3DA0A087WVF3 549 aa20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3IA0A087WXS9 549 aa20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3EA0A087X179 549 aa20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3KA0A087X1G2 549 aa20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3FA6NER0 549 aaPredicted RBP20.41■□□□□ 0.86
CLIP2-205ENST00000482424 TBC1D3LB9A6J9 549 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms