RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZSCAN5CA6NGD5 496 aaPredicted RBP20.3■□□□□ 0.84
MSH5-215ENST00000482280 YKT6O15498 198 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 RNF8O76064 485 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 CTSKP43235 329 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 GRK6P43250 576 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 METAP1P53582 386 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 PPP2CBP62714 309 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 PPP2CAP67775 309 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 SCAPQ12770 1279 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 ST3GAL2Q16842 350 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 CARD16Q5EG05 197 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 ARSIQ5FYB1 569 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 AGBL4Q5VU57 503 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 NEK5Q6P3R8 708 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 TMC6Q7Z403 805 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 VPS36Q86VN1 386 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 TRIM69Q86WT6 500 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 BAP1Q92560 729 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 TRIM11Q96F44 468 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 HEPHQ9BQS7 1158 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 SCNM1Q9BWG6 230 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 EDEM3Q9BZQ6 932 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 HAUS4Q9H6D7 363 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 PCOLCE2Q9UKZ9 415 aa20.3■□□□□ 0.84
MSH5-215ENST00000482280 H0Y8X5 98 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 KCNK3O14649 394 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 LATO43561 262 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 PCDH8O95206 1070 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 PSMA2P25787 234 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 RPL7AP62424 266 aaKnown RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 MANEALQ5VSG8 457 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 FBXL19Q6PCT2 694 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 DPY19L3Q6ZPD9 716 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 ERN2Q76MJ5 926 aaKnown RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 OXR1Q8N573 874 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 ARHGEF2Q92974 986 aaKnown RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 ELF4Q99607 663 aaPredicted RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 ORAI3Q9BRQ5 295 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 ZDHHC6Q9H6R6 413 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 AIPL1Q9NZN9 384 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 ZNF212Q9UDV6 495 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 FCF1Q9Y324 198 aaKnown RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 SCINQ9Y6U3 715 aa20.29■□□□□ 0.84
MSH5-215ENST00000482280 CNOT1A5YKK6 2376 aaKnown RBP20.29■□□□□ 0.84
MSH5-215ENST00000482280 FAM72CH0Y354 149 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 PRAMEF26H0Y7S4 382 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 TLR4O00206 839 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 FGF10O15520 208 aaPredicted RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 HYAL3O43820 417 aaPredicted RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 PCDHGA12O60330 932 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 RNGTTO60942 597 aaKnown RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 LEFTY1O75610 366 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 TPM3P06753 285 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 ITGAVP06756 1048 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 CTSLP07711 333 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 SPINK2P20155 84 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 ACVRL1P37023 503 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 CCNHP51946 323 aaPredicted RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 NEK3P51956 506 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 SNRPD1P62314 119 aaKnown RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 FAM193AP78312 1265 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 ARF5P84085 180 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 OVGP1Q12889 678 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 TDRD12Q587J7 1177 aaKnown RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 FAM72AQ5TYM5 149 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 FAM72DQ6L9T8 149 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 NLRP14Q86W24 1093 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 FAM72BQ86X60 149 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 RTL3Q8N8U3 475 aaKnown RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 MFSD2AQ8NA29 543 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 CHST14Q8NCH0 376 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 FAM131CQ96AQ9 280 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 ISG20Q96AZ6 181 aaKnown RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 NAP1L5Q96NT1 182 aaPredicted RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 TM6SF2Q9BZW4 377 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 CBX8Q9HC52 389 aa20.28■□□□□ 0.84
MSH5-215ENST00000482280 HECAQ9UBI9 543 aaPredicted RBP20.28■□□□□ 0.84
MSH5-215ENST00000482280 DAPK3O43293 454 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 BUB1O43683 1085 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 ZMPSTE24O75844 475 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 FTLP02792 175 aaPredicted RBP20.27■□□□□ 0.84
MSH5-215ENST00000482280 FTH1P19P0C7X4 201 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 GZMAP12544 262 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 AKT2P31751 481 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 HTR7P34969 479 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 UBASH3AP57075 661 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 YBEYP58557 167 aaPredicted RBP20.27■□□□□ 0.84
MSH5-215ENST00000482280 TPI1P60174 286 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 IL9RQ01113 521 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 RAD51Q06609 339 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 MAMLD1Q13495 774 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 IQCB1Q15051 598 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 PIP5KL1Q5T9C9 394 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 LUZP1Q86V48 1076 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 ZNF653Q96CK0 615 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 IQCDQ96DY2 449 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 NCAPGQ9BPX3 1015 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 HDAC8Q9BY41 377 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 EBF2Q9HAK2 575 aa20.27■□□□□ 0.84
MSH5-215ENST00000482280 MRPL47Q9HD33 250 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms