RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SKA1Q96BD8 255 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 VCPIP1Q96JH7 1222 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ELF4Q99607 663 aaPredicted RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 METTL5Q9NRN9 209 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 ADAM22Q9P0K1 906 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 TMEM63CQ9P1W3 806 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 APOBEC2Q9Y235 224 aaKnown RBP9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 DOCK9Q9BZ29 2069 aa9.94□□□□□ -0.82
TMEM39A-207ENST00000482162 GOLGA4Q13439 2230 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 C1QTNF3-AMACRE9PGA6 284 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 TNFSF14O43557 240 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 RNGTTO60942 597 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 SRGAP2O75044 1071 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 LRIG2O94898 1065 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 GJB6O95452 261 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PRNPP04156 253 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PLEKP08567 350 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ATXN1LP0C7T5 689 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 RRM1P23921 792 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 L1CAMP32004 1257 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 NSFP46459 744 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 MAPKAPK2P49137 400 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 CCT8P50990 548 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ZNF284Q2VY69 593 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 SFMBT2Q5VUG0 894 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 RETSATQ6NUM9 610 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 LINGO4Q6UY18 593 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 TMPRSS7Q7RTY8 843 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PCDH20Q8N6Y1 951 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 CHST14Q8NCH0 376 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ANKRD20A12PQ8NF67 263 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 RHBDD1Q8TEB9 315 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 TSC1Q92574 1164 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ARRDC3Q96B67 414 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 SERAC1Q96JX3 654 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 AGPAT1Q99943 283 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 MAGEH1Q9H213 219 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 NOL6Q9H6R4 1146 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 TMEM248Q9NWD8 314 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 WASF2Q9Y6W5 498 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PLXNB3Q9ULL4 1909 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PLXNA2O75051 1894 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 APC2O95996 2303 aa9.93□□□□□ -0.82
TMEM39A-207ENST00000482162 ZZEF1O43149 2961 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 TMEM131Q92545 1883 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 NYNRINQ9P2P1 1898 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ACACAQ13085 2346 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM170AA1A519 330 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 WASH4PA8MWX3 477 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 PRAMEF26H0Y7S4 382 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CBX4O00257 560 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 YKT6O15498 198 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 TEX33O43247 280 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CALB1P05937 261 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 FERP16591 822 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ACVRL1P37023 503 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ETFBP38117 255 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 C21orf59P57076 290 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CCDC15Q0P6D6 951 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CARD16Q5EG05 197 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ARSIQ5FYB1 569 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 PRAMEF14Q5SWL7 426 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ERN2Q76MJ5 926 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 PHLDB2Q86SQ0 1253 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 MCOLN2Q8IZK6 566 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CCDC185Q8N715 623 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 PNPLA1Q8N8W4 532 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 FAM172AQ8WUF8 416 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ARHGEF2Q92974 986 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 LRIG1Q96JA1 1093 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CCDC114Q96M63 670 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 SPON2Q9BUD6 331 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 GPR27Q9NS67 375 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 AIPL1Q9NZN9 384 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ZMIZ1Q9ULJ6 1067 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 PCDHGA1Q9Y5H4 931 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 CACNA1GO43497 2377 aa9.92□□□□□ -0.82
TMEM39A-207ENST00000482162 ZFHX4Q86UP3 3567 aa9.91□□□□□ -0.82
TMEM39A-207ENST00000482162 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-207ENST00000482162 COL5A1P20908 1838 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-207ENST00000482162 A0A1W2PQC6 194 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms