RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 STK19P49842 368 aaPredicted RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 BYSLQ13895 437 aaKnown RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 LBRQ14739 615 aaKnown RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 OASLQ15646 514 aaKnown RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 DLG2Q15700 870 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 FNDC3BQ53EP0 1204 aaKnown RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 MARC1Q5VT66 337 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 LINGO4Q6UY18 593 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 CCDC105Q8IYK2 499 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 BBS5Q8N3I7 341 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 PCDH20Q8N6Y1 951 aaKnown RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 PRELID2Q8N945 189 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 IL17RCQ8NAC3 791 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 FRS2Q8WU20 508 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 CAPZA3Q96KX2 299 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 VAT1Q99536 393 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 IL12RB2Q99665 862 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 GABRG3Q99928 467 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 MFSD1Q9H3U5 465 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 HAUS2Q9NVX0 235 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 SEPT3Q9UH03 358 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 DNPEPQ9ULA0 475 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 SIT1Q9Y3P8 196 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 TARSL2A2RTX5 802 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 TMEM221A6NGB7 291 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 M0R296 226 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 STK25O00506 426 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 KRIT1O00522 736 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 TMCC1O94876 653 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 ITGAVP06756 1048 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 STIP1P31948 543 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 IL12RB1P42701 662 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 NUMBP49757 651 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 SEC13P55735 322 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 NSUN2Q08J23 767 aaKnown RBP eCLIP21.09■□□□□ 0.97
VPS16-207ENST00000481812 CYTH1Q15438 398 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 HNRNPA1L2Q32P51 320 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 HEATR6Q6AI08 1181 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 SDE2Q6IQ49 451 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 DARS2Q6PI48 645 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 SERPINA13PQ6UXR4 307 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 ZNF572Q7Z3I7 529 aaPredicted RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 BMP8AQ7Z5Y6 402 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 CHPFQ8IZ52 775 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 C1orf54Q8WWF1 131 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 HTR3CQ8WXA8 447 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 PSKH2Q96QS6 385 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 USP29Q9HBJ7 922 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 RBM12Q9NTZ6 932 aaKnown RBP21.09■□□□□ 0.97
VPS16-207ENST00000481812 STON1Q9Y6Q2 735 aa21.09■□□□□ 0.97
VPS16-207ENST00000481812 SMAD6O43541 496 aaKnown RBP21.08■□□□□ 0.97
VPS16-207ENST00000481812 ATG13O75143 517 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 VAV1P15498 845 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 RBL1P28749 1068 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 CSNK1DP48730 415 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 CLCN5P51795 746 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 SLC10A7Q0GE19 358 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 WHAMMP3Q1A5X7 153 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 TEX44Q53QW1 395 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 C2orf27AQ580R0 203 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 EOGTQ5NDL2 527 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 C22orf39Q6P5X5 142 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 ATG4AQ8WYN0 398 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 ACOX2Q99424 681 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 FAM118BQ9BPY3 351 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 CHRDQ9H2X0 955 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 SMARCAL1Q9NZC9 954 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 MMP17Q9ULZ9 603 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 ACTL7AQ9Y615 435 aa21.08■□□□□ 0.97
VPS16-207ENST00000481812 EDDM13A0A1B0GTR0 161 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 ANTXRLA6NF34 631 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 TTC34A8MYJ7 566 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 CCDC188H7C350 402 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 K7ERQ8 282 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 TNFRSF10AO00220 468 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 PDE2AO00408 941 aaPredicted RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 PHF2O75151 1096 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 ZNF821O75541 412 aaPredicted RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 KLF8O95600 359 aaPredicted RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 GSRP00390 522 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 MMP13P45452 471 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 LMNB2Q03252 620 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 CKAP4Q07065 602 aaKnown RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 CWF19L1Q69YN2 538 aaKnown RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 LEKR1Q6ZMV7 388 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 MAMSTRQ6ZN01 415 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 ALLCQ8N6M5 410 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 FLCNQ8NFG4 579 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 RPLP0P6Q8NHW5 317 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 PTPRN2Q92932 1015 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 RTP4Q96DX8 246 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 CINPQ9BW66 212 aaPredicted RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 AP1M1Q9BXS5 423 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 CACNA2D2Q9NY47 1150 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 FEZ2Q9UHY8 353 aaPredicted RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 TRHDEQ9UKU6 1024 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 FCF1Q9Y324 198 aaKnown RBP21.07■□□□□ 0.96
VPS16-207ENST00000481812 MRFAP1Q9Y605 127 aa21.07■□□□□ 0.96
VPS16-207ENST00000481812 KCNK1O00180 336 aa21.06■□□□□ 0.96
VPS16-207ENST00000481812 JCHAINP01591 159 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms