RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GNA12Q03113 381 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 DNAJC3Q13217 504 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 STAT4Q14765 748 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 INAVAQ3KP66 663 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
CLK1-211ENST00000481641 FAM72AQ5TYM5 149 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 FAM72DQ6L9T8 149 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 SASS6Q6UVJ0 657 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 DHRS13Q6UX07 377 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 FAM72BQ86X60 149 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 TMIEQ8NEW7 156 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 MDM1Q8TC05 714 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 CCDC114Q96M63 670 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 CAAP1Q9H8G2 361 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 PREBQ9HCU5 417 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 FZD3Q9NPG1 666 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 OR12D3Q9UGF7 316 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 IL36AQ9UHA7 158 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 LIMA1Q9UHB6 759 aaKnown RBP18.96■□□□□ 0.63
CLK1-211ENST00000481641 FCF1Q9Y324 198 aaKnown RBP18.96■□□□□ 0.63
CLK1-211ENST00000481641 WASF2Q9Y6W5 498 aa18.96■□□□□ 0.63
CLK1-211ENST00000481641 DSPP15924 2871 aaKnown RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 ARID1BQ8NFD5 2236 aaPredicted RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 A0A1W2PQU0 124 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 LEFTY1O75610 366 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 LDOC1O95751 146 aaPredicted RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 CD160O95971 181 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 PRNPP04156 253 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 SERPINH1P50454 418 aaKnown RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 CLCN6P51797 869 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 SETMARQ53H47 684 aaPredicted RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 RWDD4Q6NW29 188 aaKnown RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 ZNF783Q6ZMS7 281 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 PROSER1Q86XN7 944 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 CCDC185Q8N715 623 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 NEK11Q8NG66 645 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 CNDP2Q96KP4 475 aaKnown RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 DYRK4Q9NR20 520 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 ANO10Q9NW15 660 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 TMEM51Q9NW97 253 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 ADAM22Q9P0K1 906 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 PPARGC1AQ9UBK2 798 aaKnown RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 DNAI1Q9UI46 699 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 DMTF1Q9Y222 760 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 ANKRD11Q6UB99 2663 aaPredicted RBP18.95■□□□□ 0.62
CLK1-211ENST00000481641 ZFYVE26Q68DK2 2539 aa18.95■□□□□ 0.62
CLK1-211ENST00000481641 LGALS16A8MUM7 142 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 PRAMEF26H0Y7S4 382 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 ENC1O14682 589 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 SDC3O75056 442 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 KRT3P12035 628 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 RFC1P35251 1148 aaPredicted RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 RECQLP46063 649 aaPredicted RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 ARRB1P49407 418 aaPredicted RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 HDAC4P56524 1084 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 MYL5Q02045 173 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 UBXN1Q04323 297 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 CLEC16AQ2KHT3 1053 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 ZNF284Q2VY69 593 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 MANEALQ5VSG8 457 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 SEL1L3Q68CR1 1132 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 RETSATQ6NUM9 610 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 TRIM72Q6ZMU5 477 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 LEKR1Q6ZMV7 388 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 ERN2Q76MJ5 926 aaKnown RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 FAM172AQ8WUF8 416 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 GBP4Q96PP9 640 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 HSD3B7Q9H2F3 369 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 CCDC86Q9H6F5 360 aaKnown RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 ERVMER34-1Q9H9K5 563 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 SEPT11Q9NVA2 429 aaKnown RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 ZFR2Q9UPR6 939 aaKnown RBP18.94■□□□□ 0.62
CLK1-211ENST00000481641 FAM208BQ5VWN6 2430 aa18.94■□□□□ 0.62
CLK1-211ENST00000481641 PCDH8O95206 1070 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 CDK11BP21127 795 aaKnown RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 NUDT1P36639 197 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 PTPN9P43378 593 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 NSFP46459 744 aaKnown RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 RXRGP48443 463 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 NCAPHQ15003 741 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 STX1AQ16623 288 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 ARL13BQ3SXY8 428 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 CARD16Q5EG05 197 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 WDR59Q6PJI9 974 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 APTXQ7Z2E3 356 aaKnown RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 KANSL1Q7Z3B3 1105 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 IQCHQ86VS3 1027 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 NLRP14Q86W24 1093 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 HORMAD1Q86X24 394 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 CENPIQ92674 756 aaPredicted RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 KLHDC7BQ96G42 594 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 SELENOOQ9BVL4 669 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 TM6SF2Q9BZW4 377 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 OSBPL2Q9H1P3 480 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 NEU3Q9UQ49 428 aa18.93■□□□□ 0.62
CLK1-211ENST00000481641 COL5A1P20908 1838 aaPredicted RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 TDRD6O60522 2096 aaKnown RBP18.93■□□□□ 0.62
CLK1-211ENST00000481641 KNTC1P50748 2209 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 TRPM6Q9BX84 2022 aa18.92■□□□□ 0.62
CLK1-211ENST00000481641 YKT6O15498 198 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms