RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 GHDCQ8N2G8 530 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 C12orf76Q8N812 135 aaPredicted RBP5.59□□□□□ -1.51
COPA-203ENST00000481040 OR6J1Q8NGC5 347 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 MYCBPAPQ8TBZ2 947 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 PSPC1Q8WXF1 523 aaKnown RBP5.59□□□□□ -1.51
COPA-203ENST00000481040 RSPH1Q8WYR4 309 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 AKAP1Q92667 903 aaKnown RBP eCLIP5.59□□□□□ -1.51
COPA-203ENST00000481040 LOXL4Q96JB6 756 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 SNX18Q96RF0 628 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 FIZ1Q96SL8 496 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 IKZF4Q9H2S9 585 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 DEF6Q9H4E7 631 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 OPA3Q9H6K4 179 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 CD248Q9HCU0 757 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 SNTG1Q9NSN8 517 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 BABAM1Q9NWV8 329 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 WDR35Q9P2L0 1181 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 DKK3Q9UBP4 350 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 UPB1Q9UBR1 384 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 AMFRQ9UKV5 643 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 A4GNTQ9UNA3 340 aa5.59□□□□□ -1.51
COPA-203ENST00000481040 ADGRF5Q8IZF2 1346 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 ADGRA2Q96PE1 1338 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 A0A1W2PRG0 241 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 OR2A25A4D2G3 310 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 RNASET2O00584 256 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 CYP27B1O15528 508 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 FOXS1O43638 330 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 STRNO43815 780 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 NCR1O76036 304 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 CDKL5O76039 1030 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 IPO7O95373 1038 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 SLU7O95391 586 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 ITPKBP27987 946 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 CIITAP33076 1130 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 STAT6P42226 847 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 LIG4P49917 911 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 MMP14P50281 582 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 STAT2P52630 851 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 MFAP4P55083 255 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 FAM189BP81408 668 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 PSG6Q00889 435 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 DDR1Q08345 913 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 SF3B3Q15393 1217 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 ZNF628Q5EBL2 1059 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 NT5DC1Q5TFE4 455 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 FAM171A1Q5VUB5 890 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 JADE1Q6IE81 842 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 HMBOX1Q6NT76 420 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 ARMC6Q6NXE6 501 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 SLC2A7Q6PXP3 512 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 TSSK4Q6SA08 328 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 KBTBD6Q86V97 674 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 DNAAF1Q8NEP3 725 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 APPL2Q8NEU8 664 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 PIGOQ8TEQ8 1089 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 MMABQ96EY8 250 aaPredicted RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 EDC3Q96F86 508 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 CCDC34Q96HJ3 373 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 GPR78Q96P69 363 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 FYTTD1Q96QD9 318 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 FNBP1Q96RU3 617 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 SRSF8Q9BRL6 282 aaKnown RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
COPA-203ENST00000481040 AKIP1Q9NQ31 210 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 SELENONQ9NZV5 590 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 HAO1Q9UJM8 370 aa5.58□□□□□ -1.52
COPA-203ENST00000481040 GAGE12BA1L429 117 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 GTPBP10A4D1E9 387 aaKnown RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 GAGE12HA6NDE8 117 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 URADA6NGE7 173 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 TTC34A8MYJ7 566 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 IFNL4K9M1U5 179 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SCAMP1O15126 338 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 PSMD10O75832 226 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SFPQP23246 707 aaKnown RBP eCLIP5.57□□□□□ -1.52
COPA-203ENST00000481040 CPT2P23786 658 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 POU1F1P28069 291 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 NDUFS1P28331 727 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 TYK2P29597 1187 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 PIP4K2AP48426 406 aaPredicted RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 GNAQP50148 359 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 PMS2P54278 862 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 ADPRHP54922 357 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 LMAN2Q12907 356 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SEMA3AQ14563 771 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 ASTE1Q2TB18 679 aaPredicted RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 AADACL2Q6P093 401 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SHQ1Q6PI26 577 aaKnown RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 C11orf88Q6PI97 169 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 SERPINA13PQ6UXR4 307 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 Q6ZWC4 215 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 MOB3CQ70IA8 216 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 CHST3Q7LGC8 479 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 GSTA5Q7RTV2 222 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 NUP93Q8N1F7 819 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 FAM110DQ8TAY7 271 aaPredicted RBP5.57□□□□□ -1.52
COPA-203ENST00000481040 GDAP1Q8TB36 358 aa5.57□□□□□ -1.52
COPA-203ENST00000481040 MGARPQ8TDB4 240 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms