RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 TTC31Q49AM3 519 aaPredicted RBP19.23■□□□□ 0.67
AGRN-208ENST00000479707 TMCO3Q6UWJ1 677 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 ARHGAP36Q6ZRI8 547 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 FAM71BQ8TC56 605 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 RAPGEF5Q92565 580 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 CCDC114Q96M63 670 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 OMDQ99983 421 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 GPR174Q9BXC1 333 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 FBXL12Q9NXK8 326 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 NCKAP1Q9Y2A7 1128 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 ALG6Q9Y672 507 aa19.23■□□□□ 0.67
AGRN-208ENST00000479707 VPS13AQ96RL7 3174 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 ZFHX2Q9C0A1 2572 aaPredicted RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 A0A0A6YYK5 440 aaPredicted RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 A0A0U1RQJ8 604 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 PLK4O00444 970 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 RNASEH2AO75792 299 aaKnown RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 KDELR1P24390 212 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 OXTRP30559 389 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 CHRNA3P32297 505 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 ACSL1P33121 698 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 PTGER3P43115 390 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 VAV2P52735 878 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 HADHBP55084 474 aaKnown RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 GEMIN4P57678 1058 aaKnown RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 SPEM2Q0P670 501 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 PDK2Q15119 407 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 ANKRD20A8PQ5CZ79 823 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 CARD16Q5EG05 197 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 AFMIDQ63HM1 303 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 DPY19L3Q6ZPD9 716 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 DSG4Q86SJ6 1040 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 MAP7D3Q8IWC1 876 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 RYBPQ8N488 228 aaPredicted RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 HDDC3Q8N4P3 179 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 PCDH20Q8N6Y1 951 aaKnown RBP19.22■□□□□ 0.67
AGRN-208ENST00000479707 PIP4K2CQ8TBX8 421 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 CEP44Q9C0F1 390 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 NEUROG2Q9H2A3 272 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 SERGEFQ9UGK8 458 aa19.22■□□□□ 0.67
AGRN-208ENST00000479707 LRRD1A4D1F6 860 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 ZSCAN5CA6NGD5 496 aaPredicted RBP19.21■□□□□ 0.67
AGRN-208ENST00000479707 RNF103O00237 685 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 TMCC1O94876 653 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 EPN2O95208 641 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 ADH1BP00325 375 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 CTSLP07711 333 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 C5AR1P21730 350 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 ARSIQ5FYB1 569 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 RHOT1Q8IXI2 618 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 AADATQ8N5Z0 425 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 LZTR1Q8N653 840 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 OR6K2Q8NGY2 324 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 TPCN2Q8NHX9 752 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 PCDH19Q8TAB3 1148 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 GRIN3AQ8TCU5 1115 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 LOXL4Q96JB6 756 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 BTBD1Q9H0C5 482 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 SP110Q9HB58 689 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 RCOR3Q9P2K3 495 aaPredicted RBP19.21■□□□□ 0.67
AGRN-208ENST00000479707 HECAQ9UBI9 543 aaPredicted RBP19.21■□□□□ 0.67
AGRN-208ENST00000479707 UBA2Q9UBT2 640 aaPredicted RBP19.21■□□□□ 0.67
AGRN-208ENST00000479707 PPM1HQ9ULR3 514 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 SCML1Q9UN30 329 aa19.21■□□□□ 0.67
AGRN-208ENST00000479707 GPR179Q6PRD1 2367 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 FAM47DPA6NHR8 397 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 C1QTNF3-AMACRE9PGA6 284 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 KPNA3O00505 521 aaPredicted RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 ALOX15BO15296 676 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 PRAMEF11O60813 436 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 IGLV3-19P01714 112 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 KRT1P04264 644 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 GKP32189 559 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 CCNHP51946 323 aaPredicted RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 ZNF33AQ06730 810 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 CYTH1Q15438 398 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 ODF2Q5BJF6 829 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 ATXN7L2Q5T6C5 722 aaPredicted RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 FAM46CQ5VWP2 391 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 SLC41A1Q8IVJ1 513 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 PIGKQ92643 395 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 RNF25Q96BH1 459 aaPredicted RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 HSPA12BQ96MM6 686 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 HEPHQ9BQS7 1158 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 ZNF670Q9BS34 389 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 SMOC1Q9H4F8 434 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 ZDHHC6Q9H6R6 413 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 TRIM10Q9UDY6 481 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 IL36AQ9UHA7 158 aa19.2■□□□□ 0.66
AGRN-208ENST00000479707 ATXN2Q99700 1313 aaKnown RBP19.2■□□□□ 0.66
AGRN-208ENST00000479707 SHROOM3Q8TF72 1996 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 GON4LQ3T8J9 2241 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 CXorf51AA0A1B0GTR3 108 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 PJA2O43164 708 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 LEFTY1O75610 366 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 MAP3K6O95382 1288 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 C7P10643 843 aa19.19■□□□□ 0.66
AGRN-208ENST00000479707 ITPKAP23677 461 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms