RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 SRCAPQ6ZRS2 3230 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 TMEM233B4DJY2 109 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 ZSCAN9O15535 394 aaPredicted RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 ALOX12P18054 663 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 AKAP5P24588 427 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 PTP4A2Q12974 167 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 OGFOD2Q6N063 350 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 SH3BP5LQ7L8J4 393 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 BBS5Q8N3I7 341 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 DDX1Q92499 740 aaKnown RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 CASS4Q9NQ75 786 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 LIMD1Q9UGP4 676 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 MYH11P35749 1972 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 DHRS12A0PJE2 317 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 SYNDIG1LA6NDD5 238 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 NDUFS3O75489 264 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 FGFR1P11362 822 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 CCNA2P20248 432 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 PPM1FP49593 454 aaPredicted RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 SEPHS1P49903 392 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 KLF1Q13351 362 aaPredicted RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 AMIGO3Q86WK7 504 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 ZFP28Q8NHY6 868 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 APOL5Q9BWW9 433 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 PORCNQ9H237 461 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 TIMMDC1Q9NPL8 285 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 RBM22Q9NW64 420 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP42-206ENST00000479544 PNMA8BQ9ULN7 279 aaPredicted RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 CBFA2T3O75081 653 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 KATNA1O75449 491 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 VNN1O95497 513 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 ZNF682O95780 498 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 CD151P48509 253 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 PPP1R8Q12972 351 aaKnown RBP13.7□□□□□ -0.22
USP42-206ENST00000479544 CRY2Q49AN0 593 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 APBB2Q92870 758 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 SCN3BQ9NY72 215 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 COQ6Q9Y2Z9 468 aa13.7□□□□□ -0.22
USP42-206ENST00000479544 COL18A1P39060 1754 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 YDJCA8MPS7 323 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 TAF4O00268 1085 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 EDIL3O43854 480 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 KCNH1O95259 989 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 MPOP05164 745 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 NFKB1P19838 968 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 IRF9Q00978 393 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 VAC14Q08AM6 782 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
USP42-206ENST00000479544 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ADGRE1Q14246 886 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 CLEC6AQ6EIG7 209 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 VSIG10LQ86VR7 867 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 UBR7Q8N806 425 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 FNIP1Q8TF40 1166 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 TSPAN17Q96FV3 270 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PRPF19Q9UMS4 504 aaKnown RBP13.69□□□□□ -0.22
USP42-206ENST00000479544 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 HEMK1Q9Y5R4 338 aaPredicted RBP13.69□□□□□ -0.22
USP42-206ENST00000479544 XIAPP98170 497 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PWP1Q13610 501 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ZNF235Q14590 738 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PFKFB4Q16877 469 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 MYLK3Q32MK0 819 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 C1orf220Q5T0J3 134 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ARMCX6Q7L4S7 300 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ERO1BQ86YB8 467 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 OR8H2Q8N162 312 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 GATA6Q92908 595 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 C9orf16Q9BUW7 83 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 SEMA4BQ9NPR2 832 aaPredicted RBP13.69□□□□□ -0.22
USP42-206ENST00000479544 LATS2Q9NRM7 1088 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PSAT1Q9Y617 370 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 A0A1W2PPW3 197 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 JAK1P23458 1154 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 TFAP2DQ7Z6R9 452 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
USP42-206ENST00000479544 SIX5Q8N196 739 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 TBCBQ99426 244 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 ASPSCR1Q9BZE9 553 aa13.69□□□□□ -0.22
USP42-206ENST00000479544 SSU72Q9NP77 194 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms