RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 LMAN2Q12907 356 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 TNFAIP1Q13829 316 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 RRP1BQ14684 758 aaKnown RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 KCNA10Q16322 511 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 KIAA0930Q6ICG6 404 aaPredicted RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 VWA1Q6PCB0 445 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 CLEC17AQ6ZS10 378 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 SLFN11Q7Z7L1 901 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 EXD3Q8N9H8 876 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 AKAP1Q92667 903 aaKnown RBP eCLIP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 FUBP1Q96AE4 644 aaKnown RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 PGAP3Q96FM1 320 aaPredicted RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 KAZALD1Q96I82 304 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 MAP7D2Q96T17 732 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 ANKRD2Q9GZV1 360 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 FBRSL1Q9HCM7 1045 aaKnown RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 ABCF3Q9NUQ8 709 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 ARGLU1Q9NWB6 273 aaPredicted RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 TAB2Q9NYJ8 693 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 AMFRQ9UKV5 643 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 FGD6Q6ZV73 1430 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 NEURL4Q96JN8 1562 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 BICDL2A1A5D9 508 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 NPIPB6E9PJ23 425 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 USP12O75317 370 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 ONECUT2O95948 504 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 AFPP02771 609 aaKnown RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 RB1P06400 928 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 FPR3P25089 353 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 DDX6P26196 483 aaKnown RBP eCLIP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 NDUFS1P28331 727 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 PCSK6P29122 969 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 TYK2P29597 1187 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 FMO4P31512 558 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 BMPR1AP36894 532 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 NRIP1P48552 1158 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 GOLGA8DPQ0D2H9 430 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 SEMA3AQ14563 771 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 ASIC2Q16515 512 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 GSTA3Q16772 222 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 DPCR1Q3MIW9 517 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 ERMARDQ5T6L9 678 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 TEDDM1Q5T9Z0 273 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 MCTP1Q6DN14 999 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 SARM1Q6SZW1 724 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 RTL10Q7L3V2 364 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 PLPPR4Q7Z2D5 763 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 PRRT2Q7Z6L0 340 aaPredicted RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 TMEM151BQ8IW70 566 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 CPXM2Q8N436 756 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 C12orf76Q8N812 135 aaPredicted RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 HSPH1Q92598 858 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 FAM149B1Q96BN6 582 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 PTCD3Q96EY7 689 aaKnown RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 C1orf74Q96LT6 269 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 GCNAQ96QF7 691 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 GPATCH1Q9BRR8 931 aaKnown RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 SFXN1Q9H9B4 322 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 SNTG1Q9NSN8 517 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 TMEM248Q9NWD8 314 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 DNMT1P26358 1616 aaKnown RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 KDM5DQ9BY66 1539 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 RGS12O14924 1447 aa7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
GAPVD1-217ENST00000479511 ROBO1Q9Y6N7 1651 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 MED14O60244 1454 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 PHLPP1O60346 1717 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 GAGE12BA1L429 117 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 WDR27A2RRH5 827 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 GAGE12HA6NDE8 117 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 UNC119BA6NIH7 251 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 A8MXE2 369 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 CTDSP2O14595 271 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 PRYO14603 147 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 PROM1O43490 865 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 CCNT1O60563 726 aaKnown RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 TBCAO75347 108 aaKnown RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 SPDEFO95238 335 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 TGDSO95455 350 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 CHRM2P08172 466 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 PRR35P0CG20 571 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 SCG2P13521 617 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 HOXB9P17482 250 aaPredicted RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 ACO1P21399 889 aaKnown RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 GSTM2P28161 218 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 HIBADHP31937 336 aaKnown RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 MRPL12P52815 198 aaKnown RBP7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 NIPAL4Q0D2K0 466 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 NTRK2Q16620 822 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 RABL3Q5HYI8 236 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 KAZNQ674X7 775 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 KIRREL2Q6UWL6 708 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 MOB3CQ70IA8 216 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
GAPVD1-217ENST00000479511 TADA2BQ86TJ2 420 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms