RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FAM90A22PA8MWA6 464 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 FAM90A12PA8MX19 464 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 FAM90A23PA8MXZ1 464 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 MDM4O15151 490 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 RNMTO43148 476 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 IL1AP01583 271 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 KLKB1P03952 638 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 CHRM4P08173 479 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 PSG1P11464 419 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 UNGP13051 313 aaPredicted RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 XBP1P17861 261 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 TBXAS1P24557 533 aaPredicted RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 GPD2P43304 727 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 PTGR1Q14914 329 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 NAA25Q14CX7 972 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 NFIL3Q16649 462 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 PRTGQ2VWP7 1150 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 SYTL3Q4VX76 610 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 ASPHD1Q5U4P2 390 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 ADGRG6Q86SQ4 1221 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 GPSM1Q86YR5 675 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 FAM217AQ8IXS0 508 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 TMEM199Q8N511 208 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 LSM14AQ8ND56 463 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 DNAAF1Q8NEP3 725 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 RFWD2Q8NHY2 731 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 NOC3LQ8WTT2 800 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 HSPH1Q92598 858 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 CNOT9Q92600 299 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 LPAR1Q92633 364 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 ZNF48Q96MX3 618 aaPredicted RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 B3GNT4Q9C0J1 378 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 ZBTB40Q9NUA8 1239 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 PDP2Q9P2J9 529 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 CNOT7Q9UIV1 285 aaKnown RBP4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 SLC13A4Q9UKG4 626 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 CNPY2Q9Y2B0 182 aa4.22□□□□□ -1.73
SMARCA1-204ENST00000478420 CCDC196A0A1B0GTZ2 297 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 C17orf102A2RUQ5 167 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 SERPINC1P01008 464 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 CD72P21854 359 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 YWHAQP27348 245 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 TNFSF8P32971 234 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 DPP6P42658 865 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 PTPN9P43378 593 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 MAPK7Q13164 816 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 RPE65Q16518 533 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 SLC18A3Q16572 532 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 Q5PR19 223 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 NAA35Q5VZE5 725 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 NUGGCQ68CJ6 796 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 IRF2BP2Q7Z5L9 587 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 TMTC1Q8IUR5 882 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 ZDHHC23Q8IYP9 409 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 ESX1Q8N693 406 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 KDM1BQ8NB78 822 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 RAB40AQ8WXH6 277 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 HTRA1Q92743 480 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 HVCN1Q96D96 273 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 ZNF333Q96JL9 665 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 CLSTN3Q9BQT9 956 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 EPHX3Q9H6B9 360 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 ENTPD7Q9NQZ7 604 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 ATP8A2Q9NTI2 1148 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 C9orf78Q9NZ63 289 aaPredicted RBP4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 NLKQ9UBE8 527 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 PLEKHB1Q9UF11 243 aaPredicted RBP4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 HSF4Q9ULV5 492 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
SMARCA1-204ENST00000478420 DDTLA6NHG4 134 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 H3BNX3 289 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 PER2O15055 1255 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 BMP15O95972 392 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 ADAP00813 363 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 FGF2P09038 288 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 TNFRSF1BP20333 461 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 BDNFP23560 247 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 RFC1P35251 1148 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 TMPRSS3P57727 454 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 PKP1Q13835 747 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 FBXO43Q4G163 708 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 ALFQ53S48 1182 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 TBC1D9BQ66K14 1250 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 PARM1Q6UWI2 310 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 SLC16A12Q6ZSM3 486 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 SERPINA11Q86U17 422 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 TMC8Q8IU68 726 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 HORMAD2Q8N7B1 307 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 ZNF366Q8N895 744 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 VCPIP1Q96JH7 1222 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 PHF7Q9BWX1 381 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 LMAN2LQ9H0V9 348 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 WASH6PQ9NQA3 447 aa4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 IFT80Q9P2H3 777 aaPredicted RBP4.2□□□□□ -1.74
SMARCA1-204ENST00000478420 SEL1LQ9UBV2 794 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms