RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ZNF653Q96CK0 615 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 DNAJC7Q99615 494 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 TNKS2Q9H2K2 1166 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 KDM4CQ9H3R0 1056 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 TM9SF3Q9HD45 589 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 OSGEPQ9NPF4 335 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 ZNHIT6Q9NWK9 470 aaKnown RBP14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 FZD10Q9ULW2 581 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 EPG5Q9HCE0 2579 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 ACACBO00763 2458 aa14.12□□□□□ -0.15
SOX2-OT-208ENST00000477928 C1QTNF3-AMACRE9PGA6 284 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 MCF2LO15068 1137 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ACVRL1P37023 503 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ADPRHP54922 357 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 YBEYP58557 167 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 GNA12Q03113 381 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 KIF19Q2TAC6 998 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 PRAMEF14Q5SWL7 426 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 KIAA0895LQ68EN5 471 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ALKBH5Q6P6C2 394 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 HDDC3Q8N4P3 179 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 CHST14Q8NCH0 376 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 CPLX3Q8WVH0 158 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 CASKIN2Q8WXE0 1202 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 FAM131CQ96AQ9 280 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ISG20Q96AZ6 181 aaKnown RBP14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 SLC6A18Q96N87 628 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 OMDQ99983 421 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 TRIM7Q9C029 511 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 ZDHHC5Q9C0B5 715 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 CAAP1Q9H8G2 361 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 HPCAL4Q9UM19 191 aa14.11□□□□□ -0.15
SOX2-OT-208ENST00000477928 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 SH3BP5O60239 455 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 OPHN1O60890 802 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 WNT1P04628 370 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 GOT1P17174 413 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 NUDT1P36639 197 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 CNTN1Q12860 1018 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 FOXC1Q12948 553 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 PIGHQ14442 188 aaPredicted RBP14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 ERMARDQ5T6L9 678 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 RWDD4Q6NW29 188 aaKnown RBP14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 SCYL2Q6P3W7 929 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 CNGA4Q8IV77 575 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 NIPA2Q8N8Q9 360 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 RTL3Q8N8U3 475 aaKnown RBP14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 NETO2Q8NC67 525 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 TMIEQ8NEW7 156 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 SPON2Q9BUD6 331 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 ATP13A1Q9HD20 1204 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 DNAAF2Q9NVR5 837 aaKnown RBP14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 GPATCH2LQ9NWQ4 482 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 WASF3Q9UPY6 502 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 SNX11Q9Y5W9 270 aa14.1□□□□□ -0.15
SOX2-OT-208ENST00000477928 AKAP13Q12802 2813 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 LRRC72A6NJI9 287 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 CBX4O00257 560 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 PRPSAP2O60256 369 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 RAMP2O60895 175 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ZNF821O75541 412 aaPredicted RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 CD160O95971 181 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 PRNPP04156 253 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 CYP1A2P05177 515 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 SYPP08247 313 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 CSRP1P21291 193 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 EPHB2P29323 1055 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 HCAR3P49019 387 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 SERPINH1P50454 418 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ARF5P84085 180 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 SLC18A3Q16572 532 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 HLA-BQ31612 363 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 PARP15Q460N3 678 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 BOLA3Q53S33 107 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 C22orf39Q6P5X5 142 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 PCDH20Q8N6Y1 951 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 OR2A12Q8NGT7 310 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 GRIN3AQ8TCU5 1115 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ARHGEF2Q92974 986 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ARRDC3Q96B67 414 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 LRIG1Q96JA1 1093 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 KLC2Q9H0B6 622 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 GAREM1Q9H706 876 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 UVRAGQ9P2Y5 699 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 IP6K2Q9UHH9 426 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 DNAI1Q9UI46 699 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 PPM1HQ9ULR3 514 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 CA5BQ9Y2D0 317 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 BTBD3Q9Y2F9 522 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 FCF1Q9Y324 198 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 ADAMTS9Q9P2N4 1935 aa14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 TPRP12270 2363 aaKnown RBP14.09□□□□□ -0.15
SOX2-OT-208ENST00000477928 A0A087X0T9 212 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms