RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 DLG4P78352 724 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 SULT2A1Q06520 285 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 PDE1CQ14123 709 aaPredicted RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 DLG2Q15700 870 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 DCAF6Q58WW2 860 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 TMEM164Q5U3C3 297 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 MSANTD2Q6P1R3 559 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 HEATR4Q86WZ0 1026 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 SLITRK4Q8IW52 837 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC117Q8IWD4 279 aaPredicted RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 FAM114A1Q8IWE2 563 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 C12orf56Q8IXR9 622 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC65Q8IXS2 484 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 ARL10Q8N8L6 244 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 TEX19Q8NA77 164 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 ANKRD52Q8NB46 1076 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 APOBEC4Q8WW27 367 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC45A3Q96JT2 553 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 HEXIM2Q96MH2 286 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 DDX50Q9BQ39 737 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 LRRC61Q9BV99 259 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 CPEB1Q9BZB8 566 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 PRDM8Q9NQV8 689 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 DONSONQ9NYP3 566 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 GULP1Q9UBP9 304 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 IPO11Q9UI26 975 aaKnown RBP7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 NAALADL1Q9UQQ1 740 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 DAAM1Q9Y4D1 1078 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 PCDHGA3Q9Y5H0 932 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 RP1P56715 2156 aa7.51□□□□□ -1.21
SPTLC1-205ENST00000477888 TYW5A2RUC4 315 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ZNF891A8MT65 544 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 EXOC3O60645 756 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 BMP15O95972 392 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CCL4P13236 92 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 PRF1P14222 555 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ZNF18P17022 549 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CD58P19256 250 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 NR1D1P20393 614 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 RECQLP46063 649 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 RPS21P63220 83 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC15Q0P6D6 951 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC12A1Q13621 1099 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 C16orf72Q14CZ0 275 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ACCSLQ4AC99 568 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ARHGAP17Q68EM7 881 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 TCTN3Q6NUS6 607 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 LVRNQ6Q4G3 990 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 Q6ZVU0 165 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ERN2Q76MJ5 926 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 TMPRSS9Q7Z410 1059 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 PHACTR4Q8IZ21 702 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 SCML4Q8N228 414 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 KYQ8NBH2 561 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 TMIEQ8NEW7 156 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ALG14Q96F25 216 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 FCRL2Q96LA5 508 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 ZSCAN31Q96LW9 406 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 LENG8Q96PV6 779 aaPredicted RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 HDAC8Q9BY41 377 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 APOBEC3BQ9UH17 382 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 XPO7Q9UIA9 1087 aaKnown RBP7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 APPL1Q9UKG1 709 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 TP53TG5Q9Y2B4 290 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 RNF215Q9Y6U7 377 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 LRRK1Q38SD2 2015 aa7.5□□□□□ -1.21
SPTLC1-205ENST00000477888 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 MED13Q9UHV7 2174 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 RP1L1Q8IWN7 2480 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 KPNA3O00505 521 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 FPGTO14772 594 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 IKBKBO14920 756 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 DUX1O43812 170 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 GABBR2O75899 941 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CNTN5O94779 1100 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 LDLRP01130 860 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 HLA-DRAP01903 254 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 FGF3P11487 239 aaPredicted RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 PDGFRAP16234 1089 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 GJB2P29033 226 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CHRNA3P32297 505 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 TBX4P57082 545 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 ADIGQ0VDE8 80 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 C1orf220Q5T0J3 134 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CCNJLQ8IV13 435 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 NELFCDQ8IXH7 590 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC4A11Q8NBS3 891 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 OR6C4Q8NGE1 309 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 OR2A12Q8NGT7 310 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CPT1CQ8TCG5 803 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 KCTD13Q8WZ19 329 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 TATDN2Q93075 761 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms