RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 BMP1P13497 986 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 GLDCP23378 1020 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 PLK1P53350 603 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 COG7P83436 770 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 TIAL1Q01085 375 aaKnown RBP eCLIP12.33□□□□□ -0.439e-7■■■■□ 23.8
PRPF39-203ENST00000477626 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 MPP7Q5T2T1 576 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 CDHR3Q6ZTQ4 885 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 CCNJLQ8IV13 435 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 OR13J1Q8NGT2 312 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 ALG13Q9NP73 1137 aaKnown RBP12.33□□□□□ -0.43
PRPF39-203ENST00000477626 CLEC4EQ9ULY5 219 aa12.33□□□□□ -0.43
PRPF39-203ENST00000477626 EPOPA6NHQ4 379 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-203ENST00000477626 LPXNO60711 386 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 JCHAINP01591 159 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
PRPF39-203ENST00000477626 FOXN2P32314 431 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 STX2P32856 288 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 USP4Q13107 963 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 NAB1Q13506 487 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 CDKN3Q16667 212 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 ATPAF2Q8N5M1 289 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 CKAP2Q8WWK9 683 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 ZC3H7BQ9UGR2 993 aaKnown RBP12.33□□□□□ -0.44
PRPF39-203ENST00000477626 ARHGAP26Q9UNA1 814 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 EXOC1LA0A1B0GW35 172 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 IL1BP01584 269 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.44
PRPF39-203ENST00000477626 NR1H3Q13133 447 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 MPP3Q13368 585 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 GAB4Q2WGN9 574 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 AGAP3Q96P47 875 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 TCF25Q9BQ70 676 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 HCFC1R1Q9NWW0 138 aa12.33□□□□□ -0.44
PRPF39-203ENST00000477626 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 A6NNZ2 444 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 MOCS2O96007 188 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 PENKP01210 267 aaPredicted RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ATP1A2P50993 1020 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ZNF77Q15935 545 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TUBB8Q3ZCM7 444 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 CERCAMQ5T4B2 595 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 RWDD4Q6NW29 188 aaKnown RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TFAP2DQ7Z6R9 452 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 DENND1CQ8IV53 801 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 PSKH2Q96QS6 385 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 CYTH2Q99418 400 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TLR9Q9NR96 1032 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 RSPH14Q9UHP6 348 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 CCL26Q9Y258 94 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ATXN2Q99700 1313 aaKnown RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TMEM120BA0PK00 339 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 RB1P06400 928 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 DNAJB2P25686 324 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 SLC1A5Q15758 541 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 SPANXN3Q5MJ09 141 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 POF1BQ8WVV4 589 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 STAMBPL1Q96FJ0 436 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 C1QTNF1Q9BXJ1 281 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 DFFAO00273 331 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 LDB2O43679 373 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ACTN2P35609 894 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ALDH1A3P47895 512 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 NPY2RP49146 381 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 GNA12Q03113 381 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 ANKRD20A4Q4UJ75 823 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 CFAP52Q8N1V2 620 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 SGSM3Q96HU1 749 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 NAT9Q9BTE0 207 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 IL22Q9GZX6 179 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 PIH1D1Q9NWS0 290 aaKnown RBP12.32□□□□□ -0.44
PRPF39-203ENST00000477626 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 RWDD3Q9Y3V2 267 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
PRPF39-203ENST00000477626 CLDN11O75508 207 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 SPATA31D3P0C874 917 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
PRPF39-203ENST00000477626 EPHB3P54753 998 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 SPATA31D4Q6ZUB0 917 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 PID1Q7Z2X4 250 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 ADGRD2Q7Z7M1 963 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 KREMEN2Q8NCW0 462 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 ACVR1CQ8NER5 493 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 TCEAL4Q96EI5 215 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 TBL1YQ9BQ87 522 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 VPS45Q9NRW7 570 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 GGT7Q9UJ14 662 aa12.31□□□□□ -0.44
PRPF39-203ENST00000477626 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms