RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	DEFB124	Q8NES8	71 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	TRIM11	Q96F44	468 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	EPAS1	Q99814	870 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	TNKS2	Q9H2K2	1166 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	EBF2	Q9HAK2	575 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	MRPL47	Q9HD33	250 aa	Known RBP	12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	HPCAL4	Q9UM19	191 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	LUC7L2	Q9Y383	392 aa	Known RBP	12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	ADAMTS9	Q9P2N4	1935 aa		12.5	□□□□□ -0.41
PTPN7-210	ENST00000477625	PLRG1	O43660	514 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	KDELR3	O43731	214 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CREB3	O43889	395 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CER1	O95813	267 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CD160	O95971	181 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	PRNP	P04156	253 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	SERPING1	P05155	500 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	TPM3	P06753	285 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	GEMIN4	P57678	1058 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CCDC15	Q0P6D6	951 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	KIF19	Q2TAC6	998 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	HLA-B	Q31612	363 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	TDRD12	Q587J7	1177 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CARD16	Q5EG05	197 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	ARSI	Q5FYB1	569 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	AGBL4	Q5VU57	503 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	DPY19L3	Q6ZPD9	716 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	VPS36	Q86VN1	386 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	PLPP6	Q8IY26	295 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	ARFGAP1	Q8N6T3	406 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	PCDH20	Q8N6Y1	951 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	RTL3	Q8N8U3	475 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	FNIP1	Q8TF40	1166 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	ISG20	Q96AZ6	181 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	ZNF653	Q96CK0	615 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	TRIM7	Q9C029	511 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	GAREM1	Q9H706	876 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	CATSPERB	Q9H7T0	1116 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	IL21R	Q9HBE5	538 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	IL36A	Q9UHA7	158 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	ANKRD6	Q9Y2G4	727 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	FCF1	Q9Y324	198 aa	Known RBP	12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	SCIN	Q9Y6U3	715 aa		12.49	□□□□□ -0.41
PTPN7-210	ENST00000477625	WASH4P	A8MWX3	477 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	EIF3CL	B5ME19	914 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	KPNA3	O00505	521 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	VILL	O15195	856 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	FGF10	O15520	208 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	LAT	O43561	262 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	RNF8	O76064	485 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	GYPC	P04921	128 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	ZNF883	P0CG24	379 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	HTR7	P34969	479 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	DNA2	P51530	1060 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	YBEY	P58557	167 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	ZNF252P-AS1	Q0IIN9	211 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	ERMARD	Q5T6L9	678 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	PIP5KL1	Q5T9C9	394 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	ADAT2	Q7Z6V5	191 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	PRPF39	Q86UA1	669 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	GRIN3A	Q8TCU5	1115 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	SKA1	Q96BD8	255 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	SLC6A18	Q96N87	628 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	EIF3C	Q99613	913 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	NCAPG	Q9BPX3	1015 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	HEPH	Q9BQS7	1158 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	XPO4	Q9C0E2	1151 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	NOL6	Q9H6R4	1146 aa	Known RBP	12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	DYRK4	Q9NR20	520 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	DONSON	Q9NYP3	566 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	MYO1A	Q9UBC5	1043 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	PCSK1N	Q9UHG2	260 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	AP4E1	Q9UPM8	1137 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.48	□□□□□ -0.41	2e-6	■■■□□ 18.5
PTPN7-210	ENST00000477625	SNX11	Q9Y5W9	270 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	ACTL7A	Q9Y615	435 aa		12.48	□□□□□ -0.41
PTPN7-210	ENST00000477625	KNL1	Q8NG31	2342 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	RNF103	O00237	685 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	BUB1	O43683	1085 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	SH3BP5	O60239	455 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	PRPSAP2	O60256	369 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	LEFTY1	O75610	366 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	PML	P29590	882 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	MIP	P30301	263 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	CASP14	P31944	242 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	NUDT1	P36639	197 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	C21orf59	P57076	290 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	TAS2R38	P59533	333 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	TPI1	P60174	286 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	PPP2CB	P62714	309 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	PPP2CA	P67775	309 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	HNRNPD	Q14103	355 aa	Known RBP	12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	NFKBIB	Q15653	356 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	PARP15	Q460N3	678 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	NEK5	Q6P3R8	708 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	LAYN	Q6UX15	382 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	ERN2	Q76MJ5	926 aa	Known RBP	12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	TRIM69	Q86WT6	500 aa		12.47	□□□□□ -0.41
PTPN7-210	ENST00000477625	ZNF354C	Q86Y25	554 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms