RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 ENTPD8Q5MY95 495 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 PIK3CD-AS1Q5SR53 167 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 TTC39AQ5SRH9 613 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 UBAP2Q5T6F2 1119 aaKnown RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ASPHD1Q5U4P2 390 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 TTLL5Q6EMB2 1281 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HMBOX1Q6NT76 420 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 RETSATQ6NUM9 610 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 AADACL2Q6P093 401 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 GJB7Q6PEY0 223 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 MMS22LQ6ZRQ5 1243 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 COLCA1Q6ZS62 124 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HEATR4Q86WZ0 1026 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ARFGAP1Q8N6T3 406 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 RBMXL3Q8N7X1 1067 aaKnown RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 LSM14AQ8ND56 463 aaKnown RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 SETD9Q8NE22 299 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ZNF548Q8NEK5 533 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HTRA1Q92743 480 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HVCN1Q96D96 273 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ZNF419Q96HQ0 510 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 TBATAQ96M53 351 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 NPLQ9BXD5 320 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 LMAN2LQ9H0V9 348 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 FAM234AQ9H0X4 552 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HIPK3Q9H422 1215 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 TTC12Q9H892 705 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ACTR5Q9H9F9 607 aaPredicted RBP2.78□□□□□ -1.96
CACUL1-202ENST00000477583 WASH6PQ9NQA3 447 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 NLKQ9UBE8 527 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 SUFUQ9UMX1 484 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 ICKQ9UPZ9 632 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 HS3ST3B1Q9Y662 390 aa2.78□□□□□ -1.96
CACUL1-202ENST00000477583 TRBV5-7A0A0A0MS05 114 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TARSL2A2RTX5 802 aaKnown RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 OR6C68A6NDL8 312 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TMEM247A6NEH6 219 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 PRSS44E7EML9 344 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 GTPBP1O00178 669 aaKnown RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 STRNO43815 780 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 HBP1O60381 514 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ATG13O75143 517 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TULP3O75386 442 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CBX6O95503 412 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 DDAH2O95865 285 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 LCKP06239 509 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 HNRNPA1P09651 372 aaKnown RBP eCLIP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 T-ENOLP0DO92 83 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CHRNB1P11230 501 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 XBP1P17861 261 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 PAX3P23760 479 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 SLC16A2P36021 539 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 PGM1P36871 562 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CDKN2AP42771 156 aaKnown RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ME1P48163 572 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 GAD2Q05329 585 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TBL3Q12788 808 aaKnown RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TDGQ13569 410 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 NAA25Q14CX7 972 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 SLC18A3Q16572 532 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 NFIL3Q16649 462 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ALG10Q5BKT4 473 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ALG10BQ5I7T1 473 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 C6orf10Q5SRN2 563 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 DAB2IPQ5VWQ8 1189 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 AAGABQ6PD74 315 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 KDELC2Q7Z4H8 507 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 IGFN1Q86VF2 1251 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 GPSM1Q86YR5 675 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 IL17REQ8NFR9 667 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CMASQ8NFW8 434 aaPredicted RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 FAR1Q8WVX9 515 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 SH3KBP1Q96B97 665 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ZFYVE19Q96K21 471 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 FRG2BQ96QU4 278 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CTAGE1Q96RT6 745 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CD180Q99467 661 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 WDR83Q9BRX9 315 aaKnown RBP2.77□□□□□ -1.97
CACUL1-202ENST00000477583 TRMOQ9BU70 441 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 IFT27Q9BW83 186 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 CXorf56Q9H5V9 222 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 ALKBH4Q9NXW9 302 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 SLC13A4Q9UKG4 626 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 PCDHA12Q9UN75 941 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 COG5Q9UP83 839 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 DHDHQ9UQ10 334 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 OSGIN2Q9Y236 505 aa2.77□□□□□ -1.97
CACUL1-202ENST00000477583 MST1RQ04912 1400 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 A6NLC8 198 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 PER2O15055 1255 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 TMCC1O94876 653 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 ADAP00813 363 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 IFIT1P09914 478 aaKnown RBP2.76□□□□□ -1.97
CACUL1-202ENST00000477583 TGFB3P10600 412 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 TNFSF8P32971 234 aa2.76□□□□□ -1.97
CACUL1-202ENST00000477583 PSMC2P35998 433 aaKnown RBP2.76□□□□□ -1.97
CACUL1-202ENST00000477583 SKIV2L2P42285 1042 aaKnown RBP2.76□□□□□ -1.97
CACUL1-202ENST00000477583 LIFRP42702 1097 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms