RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SUN1O94901 812 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 MT-CYBP00156 380 aaPredicted RBP29.34■■■□□ 2.29
VEGFA-211ENST00000476772 SHBGP04278 402 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 DLX2Q07687 328 aaPredicted RBP29.34■■■□□ 2.29
VEGFA-211ENST00000476772 CBLBQ13191 982 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 GRIN2CQ14957 1233 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 CCDC117Q8IWD4 279 aaPredicted RBP29.34■■■□□ 2.29
VEGFA-211ENST00000476772 PGBD5Q8N414 524 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 FBXO36Q8NEA4 188 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 PYROXD1Q8WU10 500 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 SMARCD2Q92925 531 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 IRF7Q92985 503 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 ALG14Q96F25 216 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 SPHK2Q9NRA0 654 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 VPS28Q9UK41 221 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 SNAP91O60641 907 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 ELK3P41970 407 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 ARF5P84085 180 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 ITKQ08881 620 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 LRRC8BQ6P9F7 803 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 IGDCC3Q8IVU1 814 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 FIBINQ8TAL6 211 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 OTUB2Q96DC9 234 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 TTC25Q96NG3 672 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 SLC25A51Q9H1U9 297 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 FAM53CQ9NYF3 392 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 GDE1Q9NZC3 331 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 CHMP2BQ9UQN3 213 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 AAR2Q9Y312 384 aaKnown RBP29.34■■■□□ 2.29
VEGFA-211ENST00000476772 MTCH2Q9Y6C9 303 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 TEX264Q9Y6I9 313 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 MYOFQ9NZM1 2061 aa29.34■■■□□ 2.29
VEGFA-211ENST00000476772 GOLGA6CA6NDK9 693 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 USP12O75317 370 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 PENKP01210 267 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-211ENST00000476772 GOLGA6DP0CG33 693 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 MLNP12872 115 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 LMAN2Q12907 356 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 ZNF235Q14590 738 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 DNAJC21Q5F1R6 531 aaKnown RBP29.33■■■□□ 2.29
VEGFA-211ENST00000476772 LRRC40Q9H9A6 602 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 LRRC4CQ9HCJ2 640 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 PIH1D1Q9NWS0 290 aaKnown RBP29.33■■■□□ 2.29
VEGFA-211ENST00000476772 GOLGA6AQ9NYA3 693 aa29.33■■■□□ 2.29
VEGFA-211ENST00000476772 NEDD8-MDP1E9PL57 170 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 SLC9A3R1O14745 358 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-211ENST00000476772 ZMPSTE24O75844 475 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 ANXA9O76027 345 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 CCDC38Q502W7 563 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 LY6G5CQ5SRR4 150 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 ADGRG2Q8IZP9 1017 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 APCDD1Q8J025 514 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 BBS2Q9BXC9 721 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 S1PR5Q9H228 398 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 CLDND1Q9NY35 253 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 KIAA1522Q9P206 1035 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-211ENST00000476772 REV3LO60673 3130 aa29.32■■■□□ 2.28
VEGFA-211ENST00000476772 A0A1W2PPC1 479 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 MUSKO15146 869 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 PSMD3O43242 534 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CD70P32970 193 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 GEMP55040 296 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 DSC2Q02487 901 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 ZNF844Q08AG5 666 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 NIPAL4Q0D2K0 466 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CTC1Q2NKJ3 1217 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 ATAT1Q5SQI0 421 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CAPN12Q6ZSI9 719 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 EP400NLQ6ZTU2 488 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 DCAF4L2Q8NA75 395 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 OR52K1Q8NGK4 314 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 IMP4Q96G21 291 aaKnown RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 PPP1R2P1Q96PQ5 205 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 VPS51Q9UID3 782 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 IFFO1Q0D2I5 559 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 ADGRE1Q14246 886 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 RFTN1Q14699 578 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CEP85LQ5SZL2 805 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CES5AQ6NT32 575 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 LINGO4Q6UY18 593 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 PRPF39Q86UA1 669 aaKnown RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 MPP5Q8N3R9 675 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 ST13P5Q8NFI4 369 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 SIGLEC10Q96LC7 697 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 APOL2Q9BQE5 337 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 DUS2Q9NX74 493 aaKnown RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 SEPT3Q9UH03 358 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 CDH7Q9ULB5 785 aa29.31■■■□□ 2.28
VEGFA-211ENST00000476772 COLQQ9Y215 455 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-211ENST00000476772 TMEM265A0A087WTH1 108 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 TTC24A2A3L6 582 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-211ENST00000476772 SYF2O95926 243 aaKnown RBP29.3■■■□□ 2.28
VEGFA-211ENST00000476772 SESN2P58004 480 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-211ENST00000476772 GPX6P59796 221 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 GPS2Q13227 327 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 BBS5Q8N3I7 341 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 IPMKQ8NFU5 416 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 BPIFB1Q8TDL5 484 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 OSCP1Q8WVF1 389 aa29.3■■■□□ 2.28
VEGFA-211ENST00000476772 LMLNQ96KR4 655 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms