RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MEX3CQ5U5Q3 659 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 BRINP3Q76B58 766 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 PRSS45Q7RTY3 260 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 GHDCQ8N2G8 530 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 ETNPPLQ8TBG4 499 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 HDAC7Q8WUI4 952 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 KLHL29Q96CT2 875 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 RSRC1Q96IZ7 334 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 TEFMQ96QE5 360 aaKnown RBP6.37□□□□□ -1.39
VPS50-212ENST00000476413 IKZF4Q9H2S9 585 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 GHITMQ9H3K2 345 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 MUC13Q9H3R2 512 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 R3HDMLQ9H3Y0 253 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 C20orf141Q9NUB4 165 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 FBXO40Q9UH90 709 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 GPR34Q9UPC5 381 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 DHDHQ9UQ10 334 aa6.37□□□□□ -1.39
VPS50-212ENST00000476413 ADGRF5Q8IZF2 1346 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 CBY3A6NI87 242 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 USP12O75317 370 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 RNF8O76064 485 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 NFATC1O95644 943 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 GALTP07902 379 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 ACADMP11310 421 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 CYP2J2P51589 502 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 CYP4A11Q02928 519 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 GALNT3Q14435 633 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 TOMM20Q15388 145 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 MOB3CQ70IA8 216 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 BOLLQ8N9W6 283 aaKnown RBP6.36□□□□□ -1.39
VPS50-212ENST00000476413 BCAS4Q8TDM0 211 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 FAR1Q8WVX9 515 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 CUL5Q93034 780 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 SAAL1Q96ER3 474 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 HIPK3Q9H422 1215 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 SNTG1Q9NSN8 517 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 KIAA1456Q9P272 454 aa6.36□□□□□ -1.39
VPS50-212ENST00000476413 TRBV5-7A0A0A0MS05 114 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 EDN2P20800 178 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 TM4SF1P30408 202 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 CHRNA5P30532 468 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 HOXD13P35453 343 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 BSGP35613 385 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 MLH1P40692 756 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 SKIV2L2P42285 1042 aaKnown RBP6.35□□□□□ -1.39
VPS50-212ENST00000476413 SLC12A2P55011 1212 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 HSF1Q00613 529 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 PDE1CQ14123 709 aaPredicted RBP6.35□□□□□ -1.39
VPS50-212ENST00000476413 SYTL3Q4VX76 610 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 PAPD7Q5XG87 772 aaKnown RBP6.35□□□□□ -1.39
VPS50-212ENST00000476413 IL20RBQ6UXL0 311 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 LRIG3Q6UXM1 1119 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 ZNF788Q6ZQV5 615 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 FAM160B2Q86V87 743 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 WDR5BQ86VZ2 330 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 DNAAF1Q8NEP3 725 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 USP6NLQ92738 828 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 DPF1Q92782 380 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 IFT27Q9BW83 186 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 SCPEP1Q9HB40 452 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 ENTPD7Q9NQZ7 604 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 PDGFCQ9NRA1 345 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 TBC1D29Q9UFV1 150 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 NRBP1Q9UHY1 535 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 SLC8A2Q9UPR5 921 aa6.35□□□□□ -1.39
VPS50-212ENST00000476413 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
VPS50-212ENST00000476413 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 MANSC4A6NHS7 340 aaPredicted RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 FMO4P31512 558 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 CPOXP36551 454 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 ARSFP54793 590 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 EIF3BP55884 814 aaKnown RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 ARF3P61204 181 aaPredicted RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 RPL7AP62424 266 aaKnown RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 ARF1P84077 181 aaKnown RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 NEXNQ0ZGT2 675 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 TMEM115Q12893 351 aaPredicted RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 ZNF268Q14587 947 aaPredicted RBP6.34□□□□□ -1.39
VPS50-212ENST00000476413 KCTD2Q14681 263 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 TMEM268Q5VZI3 342 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 RRM2BQ7LG56 351 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 UBE2Q1Q7Z7E8 422 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 TADA2BQ86TJ2 420 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 C11orf65Q8NCR3 313 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 OR4N2Q8NGD1 307 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 HASPINQ8TF76 798 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 SDF4Q9BRK5 362 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 DIAPH3Q9NSV4 1193 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 SLCO3A1Q9UIG8 710 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 CAPN7Q9Y6W3 813 aa6.34□□□□□ -1.39
VPS50-212ENST00000476413 WDR17Q8IZU2 1322 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.33□□□□□ -1.4
VPS50-212ENST00000476413 FOXO6A8MYZ6 492 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 TAF4O00268 1085 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 CYR61O00622 381 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 TIPRLO75663 272 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 SEC14L2O76054 403 aa6.33□□□□□ -1.4
VPS50-212ENST00000476413 SLPIP03973 132 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms