RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 RRM2BQ7LG56 351 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 FAM185AQ8N0U4 392 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 CPXM2Q8N436 756 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 SLC44A5Q8NCS7 719 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 HDAC2Q92769 488 aaKnown RBP4.41□□□□□ -1.7
SDHB-204ENST00000475049 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 THSD1Q9NS62 852 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 PPP1R14DQ9NXH3 145 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 HCN3Q9P1Z3 774 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
SDHB-204ENST00000475049 RAP2CQ9Y3L5 183 aa4.41□□□□□ -1.7
SDHB-204ENST00000475049 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 TRBV5-3A0A0A0MS03 114 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 TEX13CA0A0J9YWL9 993 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 C17orf113A0A1B0GUU1 675 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 A0A1W2PPH5 198 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 ARHGAP10A1A4S6 786 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 GAGE10A6NGK3 116 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 DDTLA6NHG4 134 aaPredicted RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 E5RJQ4 531 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 KIF1CO43896 1103 aaKnown RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 TBX18O95935 607 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 F9P00740 461 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 YWHAQP27348 245 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 RFC1P35251 1148 aaPredicted RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 ABCG1P45844 678 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 CCT4P50991 539 aaKnown RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 CLCNKBP51801 687 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 TMPRSS3P57727 454 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 UFM1P61960 85 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 EFNB1P98172 346 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 ZNF626Q68DY1 528 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 DPY19L2P1Q6NXN4 242 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 SHC4Q6S5L8 630 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 R3HCC1LQ7Z5L2 792 aaKnown RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.4□□□□□ -1.71
SDHB-204ENST00000475049 SLC25A41Q8N5S1 370 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 LRRC57Q8N9N7 239 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 GDPD5Q8WTR4 605 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 ATOH1Q92858 354 aaPredicted RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 OLA1Q9NTK5 396 aaKnown RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 BABAM1Q9NWV8 329 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 TRNAU1APQ9NX07 287 aaKnown RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 GRHL1Q9NZI5 618 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 SLC25A10Q9UBX3 287 aaPredicted RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 AASSQ9UDR5 926 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 PLEKHB1Q9UF11 243 aaPredicted RBP4.4□□□□□ -1.71
SDHB-204ENST00000475049 FBXO40Q9UH90 709 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 FRMD4BQ9Y2L6 1034 aa4.4□□□□□ -1.71
SDHB-204ENST00000475049 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
SDHB-204ENST00000475049 CGB1A6NKQ9 187 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 B4E171 279 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 SLC25A17O43808 307 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 TLR2O60603 784 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 ZC3H11AO75152 810 aaKnown RBP eCLIP4.39□□□□□ -1.71
SDHB-204ENST00000475049 COX7A2P14406 83 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 POU1F1P28069 291 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 TSPAN7P41732 249 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 DPP6P42658 865 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 HARS2P49590 506 aaKnown RBP4.39□□□□□ -1.71
SDHB-204ENST00000475049 CCR9P51686 369 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 ARSFP54793 590 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 TSTQ16762 297 aaKnown RBP4.39□□□□□ -1.71
SDHB-204ENST00000475049 ME3Q16798 604 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 SYTL3Q4VX76 610 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 ZNF667Q5HYK9 610 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 DEF8Q6ZN54 512 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 MOB3CQ70IA8 216 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 H1FNTQ75WM6 255 aaPredicted RBP4.39□□□□□ -1.71
SDHB-204ENST00000475049 PRSS45Q7RTY3 260 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 NANOGP1Q8N7R0 232 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 NFKBIDQ8NI38 313 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 RFFLQ8WZ73 363 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 SPAG4Q9NPE6 437 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 SEMA4BQ9NPR2 832 aaPredicted RBP4.39□□□□□ -1.71
SDHB-204ENST00000475049 ZDHHC7Q9NXF8 308 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 COG5Q9UP83 839 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 PCDHGB5Q9Y5G0 923 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 DISP3Q9P2K9 1392 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 ZMYM2Q9UBW7 1377 aa4.39□□□□□ -1.71
SDHB-204ENST00000475049 MST1RQ04912 1400 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 TRBV5-7A0A0A0MS05 114 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 A0A1W2PPC1 479 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 PABPN1LA6NDY0 278 aaKnown RBP4.38□□□□□ -1.71
SDHB-204ENST00000475049 RNMTO43148 476 aaKnown RBP4.38□□□□□ -1.71
SDHB-204ENST00000475049 CHRNB1P11230 501 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 FMO4P31512 558 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 CTCFP49711 727 aaPredicted RBP4.38□□□□□ -1.71
SDHB-204ENST00000475049 YWHAZP63104 245 aaKnown RBP4.38□□□□□ -1.71
SDHB-204ENST00000475049 MTX1Q13505 466 aa4.38□□□□□ -1.71
SDHB-204ENST00000475049 RUNX2Q13950 521 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms