RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 ARFIP2P53365 341 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 IL10RBQ08334 325 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 MSLNQ13421 630 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 RIPK1Q13546 671 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 CHI3L2Q15782 390 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 MGAT5BQ3V5L5 792 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 PARP15Q460N3 678 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 CCDC153Q494R4 210 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 N4BP2L1Q5TBK1 243 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 MBLAC2Q68D91 279 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 NADSYN1Q6IA69 706 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 KIAA0930Q6ICG6 404 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 FBXL22Q6P050 247 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 KLHDC10Q6PID8 442 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TAS1R1Q7RTX1 841 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 STRA8Q7Z7C7 330 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 PDZD8Q8NEN9 1154 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 ATP2A3Q93084 1043 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 IGSF8Q969P0 613 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 HMCESQ96FZ2 354 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 B3GALT6Q96L58 329 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TOX2Q96NM4 488 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TMEM237Q96Q45 408 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 SEPT5Q99719 369 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 APOL2Q9BQE5 337 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 SIKE1Q9BRV8 207 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 RHOJQ9H4E5 214 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 ALG13Q9NP73 1137 aaKnown RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 CHRAC1Q9NRG0 131 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 KLC4Q9NSK0 619 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TREX1Q9NSU2 369 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 KCNK4Q9NYG8 393 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 UBP1Q9NZI7 540 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 IL1RAPL1Q9NZN1 696 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TMEM216Q9P0N5 145 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.97□□□□□ -0.81
USP39-214ENST00000474572 TXNDC16Q9P2K2 825 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 LNPEPQ9UIQ6 1025 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 TRIM17Q9Y577 477 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 NUMBLQ9Y6R0 609 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
USP39-214ENST00000474572 SLC12A8A0AV02 714 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 NT5C1B-RDH14C9J2C7 533 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ADAM12O43184 909 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 CNTN5O94779 1100 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 PAPSS2O95340 614 aaPredicted RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 TBX18O95935 607 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 MMP2P08253 660 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ARNTP27540 789 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 TYK2P29597 1187 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 RENBPP51606 427 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 KCNJ2P63252 427 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 TMPRSS15P98073 1019 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 OVGP1Q12889 678 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 DUSP4Q13115 394 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 SLC14A2Q15849 920 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 HSF5Q4G112 596 aaPredicted RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 FASTKD1Q53R41 847 aaKnown RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 HSP90AA5PQ58FG0 334 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 RAP1GAP2Q684P5 730 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ALG1LQ6GMV1 187 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 FSTL4Q6MZW2 842 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 C16orf46Q6P387 395 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 PRSS55Q6UWB4 352 aaPredicted RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 SLC39A5Q6ZMH5 540 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 CLNKQ7Z7G1 428 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ZC3HC1Q86WB0 502 aaKnown RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 IPMKQ8NFU5 416 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 AZIN2Q96A70 460 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 KLHL29Q96CT2 875 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 SLC7A6OSQ96CW6 309 aaPredicted RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 VWCEQ96DN2 955 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 SCLYQ96I15 445 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 VPS39Q96JC1 886 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ZNF778Q96MU6 729 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 ZNF599Q96NL3 588 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 AGAP2Q99490 1192 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 TMEM120AQ9BXJ8 343 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 HIPK3Q9H422 1215 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 STN1Q9H668 368 aaKnown RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 TLE6Q9H808 572 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 PDFQ9HBH1 243 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 C20orf96Q9NUD7 363 aaPredicted RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 THAP1Q9NVV9 213 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 COPG2Q9UBF2 871 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 AFF4Q9UHB7 1163 aaKnown RBP9.96□□□□□ -0.82
USP39-214ENST00000474572 ANKRD6Q9Y2G4 727 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 CDY1Q9Y6F8 540 aa9.96□□□□□ -0.82
USP39-214ENST00000474572 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 J3KR12 359 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms