RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ZCWPW2Q504Y3 356 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CNKSR3Q6P9H4 555 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 SCARA5Q6ZMJ2 495 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 C1orf186Q6ZWK4 172 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 CACNA2D4Q7Z3S7 1137 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 SCML4Q8N228 414 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 RASGEF1CQ8N431 466 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 TMEM102Q8N9M5 508 aaPredicted RBP3.55□□□□□ -1.84
UBR3-208ENST00000474426 PDZD8Q8NEN9 1154 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 OR13C2Q8NGS9 318 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 AGAP11Q8TF27 550 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 SLC20A1Q8WUM9 679 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 AIDAQ96BJ3 306 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 HAUS1Q96CS2 278 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 NEU1Q99519 415 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ZSCAN5AQ9BUG6 496 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 GON7Q9BXV9 100 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 DIABLOQ9NR28 239 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 FAM105AQ9NUU6 356 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 PTTG2Q9NZH5 202 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ENPP5Q9UJA9 477 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 ZNF608Q9ULD9 1512 aaPredicted RBP3.55□□□□□ -1.84
UBR3-208ENST00000474426 KDM3AQ9Y4C1 1321 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 KIF15Q9NS87 1388 aa3.55□□□□□ -1.84
UBR3-208ENST00000474426 A0A0A0MRY4 1105 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 A0A1B0GVL5 298 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 A0A1W2PRV1 198 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 K7ESF4 209 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SNAP23O00161 211 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CLDN4O14493 209 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RGS13O14921 159 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ALOX15BO15296 676 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ALX3O95076 343 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PDGFBP01127 241 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 RPS17P08708 135 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 BPIP17213 487 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ARHGAP25P42331 645 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 FXR2P51116 673 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR3-208ENST00000474426 POU6F2P78424 691 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 BRMS1LQ5PSV4 323 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ARMC6Q6NXE6 501 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GALNT18Q6P9A2 607 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FBXO46Q6PJ61 603 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ATG14Q6ZNE5 492 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 Q6ZUG5 572 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PLPPR4Q7Z2D5 763 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TMC3Q7Z5M5 1100 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TRIM59Q8IWR1 403 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 POU5F2Q8N7G0 328 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ATP6V0D2Q8N8Y2 350 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 OR8J1Q8NGP2 316 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CHURC1Q8WUH1 139 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CPA5Q8WXQ8 436 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NMD3Q96D46 503 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 ACBD6Q9BR61 282 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 METTL22Q9BUU2 404 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 SLC25A23Q9BV35 468 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RNF38Q9H0F5 515 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 LRMDAQ9H2I8 198 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PRDM9Q9NQV7 894 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR3-208ENST00000474426 KCNH7Q9NS40 1196 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TBC1D23Q9NUY8 699 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SETD4Q9NVD3 440 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ARL8BQ9NVJ2 186 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CORO2BQ9UQ03 480 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZHX2Q9Y6X8 837 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RRBP1Q9P2E9 1410 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 C5orf51A6NDU8 294 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF716A6NP11 495 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 C6orf229H3BNL8 230 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GTPBP1O00178 669 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 TM9SF1O15321 606 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CD3EAPO15446 510 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 SRGAP3O43295 1099 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 BUB1BO60566 1050 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 CSDE1O75534 798 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 KRT75O95678 551 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RAB3DO95716 219 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SNAP29O95721 258 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CRYGCP07315 174 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SUPT20HL2P0C7V6 817 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF735P0CB33 412 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF888P0CJ79 500 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 CPEP16870 476 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CAPZA2P47755 286 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GIPRP48546 466 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF81P51508 661 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CLCNKBP51801 687 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 AGFG1P52594 562 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 TYRO3Q06418 890 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SPIRE1Q08AE8 756 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 LCP2Q13094 533 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CMPK2Q5EBM0 449 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 EXOSC6Q5RKV6 272 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 PDSS1Q5T2R2 415 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CYB5R2Q6BCY4 276 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PLEKHA7Q6IQ23 1121 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms