RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 LRRN4Q8WUT4 740 aa18.47■□□□□ 0.55
SNRPB-203ENST00000474384 HERPUD2Q9BSE4 406 aa18.47■□□□□ 0.55
SNRPB-203ENST00000474384 OSBPL8Q9BZF1 889 aa18.47■□□□□ 0.55
SNRPB-203ENST00000474384 MKRN2Q9H000 416 aaKnown RBP18.47■□□□□ 0.55
SNRPB-203ENST00000474384 SAE1Q9UBE0 346 aaPredicted RBP18.47■□□□□ 0.55
SNRPB-203ENST00000474384 H0Y858 1186 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 TMCC1O94876 653 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 NDUFV2P19404 249 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 HOXA6P31267 233 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 GARSP41250 739 aaKnown RBP18.46■□□□□ 0.55
SNRPB-203ENST00000474384 FNTBP49356 437 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 CYTH1Q15438 398 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 RASSF3Q86WH2 238 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 TMPRSS6Q8IU80 811 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 LRRC49Q8IUZ0 686 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 CASKIN2Q8WXE0 1202 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 MRGPRX1Q96LB2 322 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 PRRX2Q99811 253 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 TPSD1Q9BZJ3 242 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 CEP44Q9C0F1 390 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 EBF1Q9UH73 591 aa18.46■□□□□ 0.55
SNRPB-203ENST00000474384 GOLGA6L9A6NEM1 432 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 KIF5CO60282 957 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 PECAM1P16284 738 aaPredicted RBP18.45■□□□□ 0.54
SNRPB-203ENST00000474384 MX2P20592 715 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 TGM2P21980 687 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 PTPN7P35236 360 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 ZNF528Q3MIS6 628 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 BBS12Q6ZW61 710 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 METTL3Q86U44 580 aaKnown RBP18.45■□□□□ 0.54
SNRPB-203ENST00000474384 CACUL1Q86Y37 369 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 SLC35F6Q8N357 371 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 PCDH20Q8N6Y1 951 aaKnown RBP18.45■□□□□ 0.54
SNRPB-203ENST00000474384 CCNYQ8ND76 341 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 OR2A12Q8NGT7 310 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 ISG20Q96AZ6 181 aaKnown RBP18.45■□□□□ 0.54
SNRPB-203ENST00000474384 HAUS1Q96CS2 278 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 FAM129BQ96TA1 746 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 TLR10Q9BXR5 811 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 TM6SF2Q9BZW4 377 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 RSPH9Q9H1X1 276 aaPredicted RBP18.45■□□□□ 0.54
SNRPB-203ENST00000474384 EFR3BQ9Y2G0 817 aa18.45■□□□□ 0.54
SNRPB-203ENST00000474384 KCNK3O14649 394 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 ENC1O14682 589 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 MCF2LO15068 1137 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 AXIN1O15169 862 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 PEX11BO96011 259 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 RECQLP46063 649 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 NR2C2P49116 596 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 NRLP54845 237 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 RHOAP61586 193 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 RPS14P62263 151 aaKnown RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 SLC10A7Q0GE19 358 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 TCF15Q12870 199 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 CARD16Q5EG05 197 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 ATXN7L2Q5T6C5 722 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 CCDC181Q5TID7 509 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 KIAA1324Q6UXG2 1013 aaKnown RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 DPY19L3Q6ZPD9 716 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 LONP2Q86WA8 852 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 C17orf53Q8N3J3 647 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 RYBPQ8N488 228 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 OR8D1Q8WZ84 308 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 P3H4Q92791 437 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 NELL1Q92832 810 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 SIPA1Q96FS4 1042 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 CCDC114Q96M63 670 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 ZNF599Q96NL3 588 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 OLFM3Q96PB7 478 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 TSGA13Q96PP4 275 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 LGMNQ99538 433 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 FAM126AQ9BYI3 521 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 FBRSQ9HAH7 460 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 HECAQ9UBI9 543 aaPredicted RBP18.44■□□□□ 0.54
SNRPB-203ENST00000474384 SHROOM3Q8TF72 1996 aa18.44■□□□□ 0.54
SNRPB-203ENST00000474384 RNASEH1O60930 286 aaKnown RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 TJP3O95049 919 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 CCNCP24863 283 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 ELAVL3Q14576 367 aaKnown RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 RFTN1Q14699 578 aaPredicted RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 LBRQ14739 615 aaKnown RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 PDK1Q15118 436 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 TMCO4Q5TGY1 634 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 BZW1Q7L1Q6 419 aaKnown RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 WDR5BQ86VZ2 330 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 MMAAQ8IVH4 418 aaKnown RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 CHST14Q8NCH0 376 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 NSMCE1Q8WV22 266 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 PRCCQ92733 491 aaPredicted RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 HDAC11Q96DB2 347 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 EXOC2Q96KP1 924 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 CINPQ9BW66 212 aaPredicted RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 ZSCAN32Q9NX65 697 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 LHX3Q9UBR4 397 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 JRKLQ9Y4A0 524 aa18.43■□□□□ 0.54
SNRPB-203ENST00000474384 FARP1Q9Y4F1 1045 aaPredicted RBP18.43■□□□□ 0.54
SNRPB-203ENST00000474384 CCDC163A0A0D9SF12 145 aa18.42■□□□□ 0.54
SNRPB-203ENST00000474384 APOC4-APOC2K7ER74 178 aa18.42■□□□□ 0.54
SNRPB-203ENST00000474384 MATN3O15232 486 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms