RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 INO80DQ53TQ3 878 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 ZFYVE27Q5T4F4 411 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 IL31Q6EBC2 164 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 TTC27Q6P3X3 843 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 ADAT2Q7Z6V5 191 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 SYNPOQ8N3V7 929 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 ZNF513Q8N8E2 541 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 TXNDC5Q8NBS9 432 aaKnown RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 OR2A12Q8NGT7 310 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 RPLP0P6Q8NHW5 317 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 NKD2Q969F2 451 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 TRIM44Q96DX7 344 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 PBKQ96KB5 322 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 FAM129BQ96TA1 746 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 NELL2Q99435 816 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 IL12RB2Q99665 862 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 PRSS16Q9NQE7 514 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 DNPEPQ9ULA0 475 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 NEU2Q9Y3R4 380 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
CASC3-204ENST00000474190 ZFHX2Q9C0A1 2572 aaPredicted RBP10.56□□□□□ -0.72
CASC3-204ENST00000474190 TTC24A2A3L6 582 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 CTAGE9A4FU28 777 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 C10orf142B7Z368 130 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 K7ESF4 209 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 KCNK1O00180 336 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ZNF500O60304 480 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 TJP3O95049 919 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 MMP2P08253 660 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 CCNCP24863 283 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 RBL1P28749 1068 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 SERPINB6P35237 376 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ETFBP38117 255 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 CLCN5P51795 746 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ZNF33AQ06730 810 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 SLC20A2Q08357 652 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 NIPAL4Q0D2K0 466 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 XRCC4Q13426 336 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 DLG2Q15700 870 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 SLC45A4Q5BKX6 768 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 C22orf39Q6P5X5 142 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 DRICH1Q6PGQ1 229 aaPredicted RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 LRRC49Q8IUZ0 686 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 KLHDC8BQ8IXV7 354 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 GLIS1Q8NBF1 620 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 FLCNQ8NFG4 579 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ARRDC2Q8TBH0 407 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 P3H4Q92791 437 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ISG20Q96AZ6 181 aaKnown RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 TADA1Q96BN2 335 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 RTP4Q96DX8 246 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ZNF599Q96NL3 588 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 MAK16Q9BXY0 300 aaKnown RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 MKRN2Q9H000 416 aaKnown RBP10.55□□□□□ -0.72
CASC3-204ENST00000474190 FAM86C1Q9NVL1 165 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 SARDHQ9UL12 918 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 MMP17Q9ULZ9 603 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 ATP8A1Q9Y2Q0 1164 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 SAR1BQ9Y6B6 198 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 VPS13AQ96RL7 3174 aa10.55□□□□□ -0.72
CASC3-204ENST00000474190 BCLAF3A2AJT9 711 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 INSIG1O15503 277 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 GFRA3O60609 400 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 SIN3BO75182 1162 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 PAPSS2O95340 614 aaPredicted RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 HLA-DQB2P05538 268 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ATP5BP06576 529 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 PTPN3P26045 913 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 NTSR1P30989 418 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 GKP32189 559 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 PTPN5P54829 565 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 SATB1Q01826 763 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 TCF15Q12870 199 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 HNRNPDQ14103 355 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 PDK1Q15118 436 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CRY1Q16526 586 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ATXN7L2Q5T6C5 722 aaPredicted RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 SEL1L2Q5TEA6 688 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 TMCO4Q5TGY1 634 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 Q6ZVU0 165 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 SYT13Q7L8C5 426 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ZNF572Q7Z3I7 529 aaPredicted RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 PRUNE1Q86TP1 453 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 ZC3H18Q86VM9 953 aaKnown RBP10.54□□□□□ -0.72
CASC3-204ENST00000474190 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
CASC3-204ENST00000474190 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms