RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 WDFY4Q6ZS81 3184 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 A0A1W2PP55 124 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 LRRD1A4D1F6 860 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 RNASEH2AO75792 299 aaKnown RBP14.01□□□□□ -0.17
USF1-205ENST00000473969 EPN2O95208 641 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 IGLV3-19P01714 112 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 COMTP21964 271 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 CHRNA3P32297 505 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 RHOAP61586 193 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 INO80DQ53TQ3 878 aaPredicted RBP14.01□□□□□ -0.17
USF1-205ENST00000473969 LRRC38Q5VT99 294 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 LYSMD4Q5XG99 296 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 LEKR1Q6ZMV7 388 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 DAAM2Q86T65 1068 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 RGL4Q8IZJ4 473 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 DEFB119Q8N690 84 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 ACRBPQ8NEB7 543 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 OR2A12Q8NGT7 310 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.01□□□□□ -0.17
USF1-205ENST00000473969 PPP1R16AQ96I34 528 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 HEPHQ9BQS7 1158 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 GPR174Q9BXC1 333 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 ARRDC1-AS1Q9H2J1 176 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 IL36AQ9UHA7 158 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.01□□□□□ -0.17
USF1-205ENST00000473969 ALG6Q9Y672 507 aa14.01□□□□□ -0.17
USF1-205ENST00000473969 LRRC72A6NJI9 287 aa14□□□□□ -0.17
USF1-205ENST00000473969 BTNL10A8MVZ5 291 aa14□□□□□ -0.17
USF1-205ENST00000473969 MEI4A8MW99 385 aa14□□□□□ -0.17
USF1-205ENST00000473969 KPNA3O00505 521 aaPredicted RBP14□□□□□ -0.17
USF1-205ENST00000473969 FOXD2O60548 495 aaPredicted RBP14□□□□□ -0.17
USF1-205ENST00000473969 BUB1BO60566 1050 aaPredicted RBP14□□□□□ -0.17
USF1-205ENST00000473969 PRAMEF11O60813 436 aa14□□□□□ -0.17
USF1-205ENST00000473969 LRP3O75074 770 aa14□□□□□ -0.17
USF1-205ENST00000473969 TMCC1O94876 653 aa14□□□□□ -0.17
USF1-205ENST00000473969 IGSF6O95976 241 aa14□□□□□ -0.17
USF1-205ENST00000473969 KRT1P04264 644 aa14□□□□□ -0.17
USF1-205ENST00000473969 KDELR1P24390 212 aa14□□□□□ -0.17
USF1-205ENST00000473969 ZNF33AQ06730 810 aa14□□□□□ -0.17
USF1-205ENST00000473969 SPEM2Q0P670 501 aa14□□□□□ -0.17
USF1-205ENST00000473969 DPYSL3Q14195 570 aa14□□□□□ -0.17
USF1-205ENST00000473969 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
USF1-205ENST00000473969 WDR45BQ5MNZ6 344 aa14□□□□□ -0.17
USF1-205ENST00000473969 DPY19L3Q6ZPD9 716 aa14□□□□□ -0.17
USF1-205ENST00000473969 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
USF1-205ENST00000473969 PLPP6Q8IY26 295 aa14□□□□□ -0.17
USF1-205ENST00000473969 BBS5Q8N3I7 341 aa14□□□□□ -0.17
USF1-205ENST00000473969 TMIEQ8NEW7 156 aa14□□□□□ -0.17
USF1-205ENST00000473969 CADM4Q8NFZ8 388 aa14□□□□□ -0.17
USF1-205ENST00000473969 GRIN3AQ8TCU5 1115 aa14□□□□□ -0.17
USF1-205ENST00000473969 PIGKQ92643 395 aa14□□□□□ -0.17
USF1-205ENST00000473969 GDAP1L1Q96MZ0 367 aa14□□□□□ -0.17
USF1-205ENST00000473969 TM6SF2Q9BZW4 377 aa14□□□□□ -0.17
USF1-205ENST00000473969 NEUROG2Q9H2A3 272 aa14□□□□□ -0.17
USF1-205ENST00000473969 CD93Q9NPY3 652 aa14□□□□□ -0.17
USF1-205ENST00000473969 KLHL11Q9NVR0 708 aa14□□□□□ -0.17
USF1-205ENST00000473969 HECAQ9UBI9 543 aaPredicted RBP14□□□□□ -0.17
USF1-205ENST00000473969 IPO11Q9UI26 975 aaKnown RBP14□□□□□ -0.17
USF1-205ENST00000473969 PPM1HQ9ULR3 514 aa14□□□□□ -0.17
USF1-205ENST00000473969 FZD4Q9ULV1 537 aa14□□□□□ -0.17
USF1-205ENST00000473969 TFR2Q9UP52 801 aa14□□□□□ -0.17
USF1-205ENST00000473969 HYOU1Q9Y4L1 999 aa14□□□□□ -0.17
USF1-205ENST00000473969 FANCMQ8IYD8 2048 aa14□□□□□ -0.17
USF1-205ENST00000473969 DOCK4Q8N1I0 1966 aa14□□□□□ -0.17
USF1-205ENST00000473969 BCLAF3A2AJT9 711 aaKnown RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 FAM47DPA6NHR8 397 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 PSTPIP1O43586 416 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 PALMO75781 387 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 POP4O95707 220 aaKnown RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 SEMA4FO95754 770 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 GSRP00390 522 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 CD48P09326 243 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 C7P10643 843 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ARSEP51690 589 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 CCNHP51946 323 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 IL10RBQ08334 325 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 RFTN1Q14699 578 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 AFMIDQ63HM1 303 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 C11orf63Q6NUN7 778 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 RABEPKQ7Z6M1 372 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 LRRC49Q8IUZ0 686 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 TMEM139Q8IV31 216 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 DCLK2Q8N568 766 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ATPAF2Q8N5M1 289 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 C12orf50Q8NA57 414 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 OR2AP1Q8NGE2 309 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 OR14C36Q8NHC7 312 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 FAM71BQ8TC56 605 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 SNX19Q92543 992 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 TSC1Q92574 1164 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ZNF419Q96HQ0 510 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 HSPA12BQ96MM6 686 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 CINPQ9BW66 212 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 KLC2Q9H0B6 622 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms