RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NPIPB3Q92617 1050 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 TAAR9Q96RI9 348 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 LITAFQ99732 161 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 ASCL2Q99929 193 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 MMTAG2Q9BU76 263 aaKnown RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 OSBPL5Q9H0X9 879 aaPredicted RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CCDC177Q9NQR7 707 aaPredicted RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 TMEM160Q9NX00 188 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 SMARCAL1Q9NZC9 954 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CNTN6Q9UQ52 1028 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 SBNO2Q9Y2G9 1366 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CROCC2H7BZ55 1655 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 KIAA0556O60303 1618 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 IQGAP2Q13576 1575 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF608Q9ULD9 1512 aaPredicted RBP2.03□□□□□ -2.08
CCDC39-203ENST00000473854 SNAPC4Q5SXM2 1469 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 CLIP1P30622 1438 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 A0A1W2PS18 150 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 OR2W5A6NFC9 320 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 LILRA5A6NI73 299 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 M0QZQ0 153 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 NKX2-8O15522 239 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 PMS2P2O95744 297 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 CH25HO95992 272 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 VIPP01282 170 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 IDEP14735 1019 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 RPL17P18621 184 aaKnown RBP2.03□□□□□ -2.08
CCDC39-203ENST00000473854 FMO4P31512 558 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 KRT9P35527 623 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 CSHL1Q14406 222 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 ZBTB34Q8NCN2 500 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 OR13A1Q8NGR1 328 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 PAAF1Q9BRP4 392 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 WDR13Q9H1Z4 485 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 HIPK3Q9H422 1215 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 AASDHPPTQ9NRN7 309 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 FBXO4Q9UKT5 387 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 VDAC3Q9Y277 283 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 PAM16Q9Y3D7 125 aa2.03□□□□□ -2.08
CCDC39-203ENST00000473854 PRRC2AP48634 2157 aaKnown RBP2.03□□□□□ -2.08
CCDC39-203ENST00000473854 CDC42BPAQ5VT25 1732 aa2.03□□□□□ -2.09
CCDC39-203ENST00000473854 SUPT6HQ7KZ85 1726 aaKnown RBP2.03□□□□□ -2.09
CCDC39-203ENST00000473854 GCC2Q8IWJ2 1684 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ADCY10Q96PN6 1610 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 GAPVD1Q14C86 1478 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 PDS5BQ9NTI5 1447 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 TMEM247A6NEH6 219 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 KDM4EB2RXH2 506 aaPredicted RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 DHX16O60231 1041 aaKnown RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 TIPRLO75663 272 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 HLA-DQA2P01906 255 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 SLC5A1P13866 664 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 MARK3P27448 753 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 RPL3P39023 403 aaKnown RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ADORA2A-AS1P86434 159 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 RHAGQ02094 409 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ZBTB16Q05516 673 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 MYBPC2Q14324 1141 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 POLD3Q15054 466 aaPredicted RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ZNF876PQ49A33 203 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ARL13AQ5H913 290 aaPredicted RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 FAAP20Q6NZ36 180 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 FAM122CQ6P4D5 195 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 OVCH2Q7RTZ1 564 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ANKS1BQ7Z6G8 1248 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 KIAA0319LQ8IZA0 1049 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 PGBD5Q8N414 524 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 DMBX1Q8NFW5 382 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 LNX1Q8TBB1 728 aaPredicted RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 HCAR2Q8TDS4 363 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 APIPQ96GX9 242 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 C17orf77Q96MU5 243 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 STRBPQ96SI9 672 aaKnown RBP2.02□□□□□ -2.09
CCDC39-203ENST00000473854 LRFN1Q9P244 771 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 SEL1LQ9UBV2 794 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 L1RE1Q9UN81 338 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 ADGBQ8N7X0 1667 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 SHROOM2Q13796 1616 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 HECW1Q76N89 1606 aa2.02□□□□□ -2.09
CCDC39-203ENST00000473854 MAGI3Q5TCQ9 1506 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 IFT140Q96RY7 1462 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 FYCO1Q9BQS8 1478 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 FHOD3Q2V2M9 1422 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 A8MU10 97 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 HSPB6O14558 160 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 RNMTO43148 476 aaKnown RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 MGEA5O60502 916 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 TUBBP07437 444 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 WEE2P0C1S8 567 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 IL15P40933 162 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 OAZ1P54368 228 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 TUBB4BP68371 445 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 TNFAIP1Q13829 316 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 DHX34Q14147 1143 aaKnown RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 CTTNQ14247 550 aaKnown RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 C5orf22Q49AR2 442 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 BRDTQ58F21 947 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 FAM171A1Q5VUB5 890 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 CRTC1Q6UUV9 634 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 NFE4Q86UQ8 179 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms