RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 CDH19Q9H159 772 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 AGPAT3Q9NRZ7 376 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 DKK3Q9UBP4 350 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 APOBEC3BQ9UH17 382 aaKnown RBP11.42□□□□□ -0.58
MACF1-215ENST00000473843 ZFR2Q9UPR6 939 aaKnown RBP11.42□□□□□ -0.58
MACF1-215ENST00000473843 TP53TG5Q9Y2B4 290 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
MACF1-215ENST00000473843 ARHGEF17Q96PE2 2063 aaPredicted RBP11.42□□□□□ -0.58
MACF1-215ENST00000473843 PRRC2CQ9Y520 2896 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 POM121BA6NF01 834 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 CAPN5O15484 640 aaPredicted RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 ACSL4O60488 711 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 GCATO75600 419 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 CNTN5O94779 1100 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 LUC7L3O95232 432 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 IGLV3-27P01718 113 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 HOXD13P35453 343 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 TKTL1P51854 596 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 ZFP36L1Q07352 338 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 PDE1CQ14123 709 aaPredicted RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 PPP1R26Q5T8A7 1209 aaPredicted RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 NADSYN1Q6IA69 706 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 CLEC17AQ6ZS10 378 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 BHLHA9Q7RTU4 235 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 PIGZQ86VD9 579 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 APCDD1Q8J025 514 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 RBFAQ8N0V3 343 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 IL22RA1Q8N6P7 574 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 ARL10Q8N8L6 244 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 APOBEC4Q8WW27 367 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 AZIN2Q96A70 460 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
MACF1-215ENST00000473843 LRRN3Q9H3W5 708 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 PRDM8Q9NQV8 689 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 DONSONQ9NYP3 566 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 PDZD2O15018 2839 aa11.41□□□□□ -0.58
MACF1-215ENST00000473843 EFCAB7A8K855 629 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 AGRPO00253 132 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 MCF2LO15068 1137 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 EIF3DO15371 548 aaKnown RBP eCLIP11.4□□□□□ -0.586e-6■□□□□ 8.4
MACF1-215ENST00000473843 PCDH8O95206 1070 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 BMP15O95972 392 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 C4BPAP04003 597 aaKnown RBP11.4□□□□□ -0.58
MACF1-215ENST00000473843 RPN1P04843 607 aaKnown RBP11.4□□□□□ -0.58
MACF1-215ENST00000473843 ZNF18P17022 549 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 CASP4P49662 377 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 TERF1P54274 439 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 PRSS12P56730 875 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 SULT2A1Q06520 285 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 EIF2B5Q13144 721 aaKnown RBP11.4□□□□□ -0.58
MACF1-215ENST00000473843 C1orf61Q13536 156 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 SEPT6Q14141 434 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 KYQ8NBH2 561 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 EDEM1Q92611 657 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 MYEOVQ96EZ4 313 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 LRRC61Q9BV99 259 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 ULBP1Q9BZM6 244 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 DNAI2Q9GZS0 605 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
MACF1-215ENST00000473843 GULP1Q9UBP9 304 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 LIMCH1Q9UPQ0 1083 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 LRP4O75096 1905 aa11.4□□□□□ -0.58
MACF1-215ENST00000473843 LRRIQ3A6PVS8 624 aaPredicted RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 CLIC2O15247 247 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 YY2O15391 372 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 SPINT1O43278 529 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 TGFB1I1O43294 461 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 RECQLP46063 649 aaPredicted RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 SNRPFP62306 86 aaKnown RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 CLDN10P78369 228 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 CDC20Q12834 499 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 TPRG1LQ5T0D9 272 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 BSPRYQ5W0U4 402 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 SPOPLQ6IQ16 392 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 MSANTD2Q6P1R3 559 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 CCNJLQ8IV13 435 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 PHACTR4Q8IZ21 702 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 OR6C4Q8NGE1 309 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 PLEKHO2Q8TD55 490 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 NDRG1Q92597 394 aaKnown RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 ERCC4Q92889 916 aaPredicted RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 EPSTI1Q96J88 318 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 SLC45A3Q96JT2 553 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 TCEAL2Q9H3H9 227 aaPredicted RBP11.39□□□□□ -0.59
MACF1-215ENST00000473843 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 NAALADL1Q9UQQ1 740 aa11.39□□□□□ -0.59
MACF1-215ENST00000473843 RAD51BO15315 384 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms