RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 AJAP1Q9UKB5 411 aaPredicted RBP13.84□□□□□ -0.19
CHD3-209ENST00000473376 NBEAQ8NFP9 2946 aa13.84□□□□□ -0.19
CHD3-209ENST00000473376 A0A0D9SEW6 157 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 A0A1W2PQU0 124 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 FAM149AA5PLN7 773 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 KPNA3O00505 521 aaPredicted RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 ZNF821O75541 412 aaPredicted RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 THEGLP0DJG4 465 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 DGKAP23743 735 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 MAT2AP31153 395 aaKnown RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 NEK3P51956 506 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 RNASE9P60153 205 aaKnown RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 RPS21P63220 83 aaKnown RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 DNAJC3Q13217 504 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 ARL13BQ3SXY8 428 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 HES3Q5TGS1 186 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 SNIP1Q8TAD8 396 aaKnown RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 EPS8L1Q8TE68 723 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 GRAMD1AQ96CP6 724 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 FEM1CQ96JP0 617 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 LENG8Q96PV6 779 aaPredicted RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 HEPHQ9BQS7 1158 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 DUSP23Q9BVJ7 150 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 GOLGA4Q13439 2230 aaKnown RBP13.83□□□□□ -0.2
CHD3-209ENST00000473376 LAMA5O15230 3695 aa13.83□□□□□ -0.2
CHD3-209ENST00000473376 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 F8VZ95 297 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TK2O00142 265 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TOR1BO14657 336 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TSPAN6O43657 245 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 SNAP91O60641 907 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 ALPPL2P10696 532 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 CKMT1AP12532 417 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 MMP8P22894 467 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 L1CAMP32004 1257 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 FLT3P36888 993 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 EIF2S3P41091 472 aaKnown RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 GSCP56915 257 aaPredicted RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 NOMO3P69849 1222 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 GNA12Q03113 381 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TARDBPQ13148 414 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHD3-209ENST00000473376 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 COL9A2Q14055 689 aaPredicted RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 SOWAHCQ53LP3 525 aaPredicted RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 CARD16Q5EG05 197 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 C19orf48Q6RUI8 117 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 DPY19L3Q6ZPD9 716 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 STRADAQ7RTN6 431 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 SLC25A45Q8N413 288 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 HNRNPLLQ8WVV9 542 aaKnown RBP13.82□□□□□ -0.2
CHD3-209ENST00000473376 BAP1Q92560 729 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 ARRDC3Q96B67 414 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 ARHGEF26Q96DR7 871 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 MAGEH1Q9H213 219 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 NLGN3Q9NZ94 848 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
CHD3-209ENST00000473376 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 A6NNZ2 444 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 K7ERQ8 282 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 PLK4O00444 970 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 SCAMP1O15126 338 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 SLC31A1O15431 190 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 RRP8O43159 456 aaKnown RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 SMAD6O43541 496 aaKnown RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 LEFTY1O75610 366 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 PIAS2O75928 621 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 CYP1A1P04798 512 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 ADRB3P13945 408 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 RHOQP17081 205 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 RRM1P23921 792 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 ADRA1BP35368 520 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 PTPN9P43378 593 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 ABCG1P45844 678 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 HNRNPKP61978 463 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHD3-209ENST00000473376 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 KYAT3Q6YP21 454 aaKnown RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 DENND6BQ8NEG7 585 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 ENOX1Q8TC92 643 aaKnown RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 CENPIQ92674 756 aaPredicted RBP13.81□□□□□ -0.2
CHD3-209ENST00000473376 TBATAQ96M53 351 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 SLC17A9Q9BYT1 436 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 ATP13A1Q9HD20 1204 aa13.81□□□□□ -0.2
CHD3-209ENST00000473376 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms