RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TBC1D3FA6NER0 549 aaPredicted RBP23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TBC1D3LB9A6J9 549 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TBC1D3HP0C7X1 549 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 EPHB2P29323 1055 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 PMLP29590 882 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 HLA-BQ31612 363 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TBC1D3GQ6DHY5 549 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TBC1D3CQ6IPX1 549 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 ADAT2Q7Z6V5 191 aaKnown RBP23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TBC1D3Q8IZP1 549 aaPredicted RBP23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 RTL3Q8N8U3 475 aaKnown RBP23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 CHST14Q8NCH0 376 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 ZNF653Q96CK0 615 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 EBF2Q9HAK2 575 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 IL36AQ9UHA7 158 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 HPCAL4Q9UM19 191 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 ANKRD6Q9Y2G4 727 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 BZW2Q9Y6E2 419 aaKnown RBP23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 SCINQ9Y6U3 715 aa23.01■■□□□ 1.27
PTP4A1-203ENST00000473334 TMEM191CA6NGB0 347 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 KPNA3O00505 521 aaPredicted RBP23■■□□□ 1.27
PTP4A1-203ENST00000473334 CREB3O43889 395 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 ZNF821O75541 412 aaPredicted RBP23■■□□□ 1.27
PTP4A1-203ENST00000473334 ZNF883P0CG24 379 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 MYBL1P10243 752 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 GEMIN4P57678 1058 aaKnown RBP23■■□□□ 1.27
PTP4A1-203ENST00000473334 PPP2CBP62714 309 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 PPP2CAP67775 309 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 ZBED6P86452 979 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 POLD3Q15054 466 aaPredicted RBP23■■□□□ 1.27
PTP4A1-203ENST00000473334 KIF19Q2TAC6 998 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 HGSNATQ68CP4 663 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 LAYNQ6UX15 382 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 DPY19L3Q6ZPD9 716 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 FNIP1Q8TF40 1166 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 SLC6A18Q96N87 628 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 ISCUQ9H1K1 167 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 CATSPERBQ9H7T0 1116 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 IL21RQ9HBE5 538 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 DYRK4Q9NR20 520 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 CAPN11Q9UMQ6 739 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 FCF1Q9Y324 198 aaKnown RBP23■■□□□ 1.27
PTP4A1-203ENST00000473334 SNX11Q9Y5W9 270 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 ACTL7AQ9Y615 435 aa23■■□□□ 1.27
PTP4A1-203ENST00000473334 LATO43561 262 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 CD160O95971 181 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 HTR7P34969 479 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 CCDC15Q0P6D6 951 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 GRIN3AQ8TCU5 1115 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 ISG20Q96AZ6 181 aaKnown RBP22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 ARRDC3Q96B67 414 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 TM7SF3Q9NS93 570 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 AP4E1Q9UPM8 1137 aa22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 FNDC3AQ9Y2H6 1198 aaKnown RBP22.99■■□□□ 1.27
PTP4A1-203ENST00000473334 PCNX2A6NKB5 2137 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 WASH4PA8MWX3 477 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 VILLO15195 856 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 FGF10O15520 208 aaPredicted RBP22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 RNF8O76064 485 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 SERPING1P05155 500 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 TPM3P06753 285 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 HNRNPDQ14103 355 aaKnown RBP22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 CARD16Q5EG05 197 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 ARSIQ5FYB1 569 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 PIP5KL1Q5T9C9 394 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 VPS36Q86VN1 386 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 TRIM69Q86WT6 500 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 NAXDQ8IW45 347 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 CPLX3Q8WVH0 158 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 SKA1Q96BD8 255 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 PPP1R16AQ96I34 528 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 HEPHQ9BQS7 1158 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 TRIM7Q9C029 511 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 NOL6Q9H6R4 1146 aaKnown RBP22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 PREBQ9HCU5 417 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 MRPL47Q9HD33 250 aaKnown RBP22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 AASDHPPTQ9NRN7 309 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 MYO1AQ9UBC5 1043 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 LUC7L2Q9Y383 392 aaKnown RBP22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 WASF2Q9Y6W5 498 aa22.98■■□□□ 1.27
PTP4A1-203ENST00000473334 ZSCAN5CA6NGD5 496 aaPredicted RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 EIF3CLB5ME19 914 aaKnown RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 KDELR3O43731 214 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 SH3BP5O60239 455 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 LEFTY1O75610 366 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 GYPCP04921 128 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 NUDT1P36639 197 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 CTSKP43235 329 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 DNA2P51530 1060 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 CCNHP51946 323 aaPredicted RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 C21orf59P57076 290 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 YBEYP58557 167 aaPredicted RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 TAS2R38P59533 333 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 TPI1P60174 286 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 PRPF39Q86UA1 669 aaKnown RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 ZNF354CQ86Y25 554 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 PLPP6Q8IY26 295 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 ARFGAP1Q8N6T3 406 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 SERAC1Q96JX3 654 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 EIF3CQ99613 913 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms