RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RAMP2O60895 175 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 CTSLP07711 333 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 HTR7P34969 479 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 GJC1P36383 396 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 ARHGAP25P42331 645 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 HCAR3P49019 387 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 STARD3Q14849 445 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 POLD3Q15054 466 aaPredicted RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 PLK5Q496M5 336 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 KIAA1324Q6UXG2 1013 aaKnown RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 Q6ZVU0 165 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 PGBD3Q8N328 593 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 PCDH19Q8TAB3 1148 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 NCAPGQ9BPX3 1015 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 C2orf49Q9BVC5 232 aaPredicted RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 MAGEH1Q9H213 219 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 ARRDC1-AS1Q9H2J1 176 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 CATSPERBQ9H7T0 1116 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 PDFQ9HBH1 243 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 ITM2CQ9NQX7 267 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 USP36Q9P275 1121 aaKnown RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 SERGEFQ9UGK8 458 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 SUN2Q9UH99 717 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 CYP8B1Q9UNU6 501 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 FCF1Q9Y324 198 aaKnown RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 A0A0A6YYK5 440 aaPredicted RBP13.38□□□□□ -0.27
TPM3-216ENST00000473036 TARSL2A2RTX5 802 aaKnown RBP13.38□□□□□ -0.27
TPM3-216ENST00000473036 J3KR12 359 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 BUB1O43683 1085 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 KCNK5O95279 499 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 DESP17661 470 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 COMTP21964 271 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
TPM3-216ENST00000473036 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 SERPINH1P50454 418 aaKnown RBP13.38□□□□□ -0.27
TPM3-216ENST00000473036 TPMTP51580 245 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 CDH6P55285 790 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 ST8SIA6P61647 398 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 SERINC3Q13530 473 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 METTL3Q86U44 580 aaKnown RBP13.38□□□□□ -0.27
TPM3-216ENST00000473036 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 ATP11CQ8NB49 1132 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 OR2A12Q8NGT7 310 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 UBE2Q2Q8WVN8 375 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 SIPA1Q96FS4 1042 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 TNKS2Q9H2K2 1166 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 ALG6Q9Y672 507 aa13.38□□□□□ -0.27
TPM3-216ENST00000473036 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 PLK4O00444 970 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 MID1O15344 667 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 RHOBTB1O94844 696 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 MPLP40238 635 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 PAPOLAP51003 745 aaKnown RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 VAV2P52735 878 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 NDST2P52849 883 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 CCZ1BP86790 482 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 SF3A2Q15428 464 aaKnown RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 ELF2Q15723 593 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 ACCSLQ4AC99 568 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 PMS2CLQ68D20 193 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 MMAAQ8IVH4 418 aaKnown RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 AADATQ8N5Z0 425 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 DEFB119Q8N690 84 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 KDF1Q8NAX2 398 aaPredicted RBP13.37□□□□□ -0.27
TPM3-216ENST00000473036 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 LCMT1Q9UIC8 334 aa13.37□□□□□ -0.27
TPM3-216ENST00000473036 PI4KAP42356 2102 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 H3BRJ5 948 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 PEX11BO96011 259 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 CCDC175P0C221 793 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 KCNA4P22459 653 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 KDELR1P24390 212 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 GKP32189 559 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 DRD3P35462 400 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 PTGER3P43115 390 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 NOP2P46087 812 aaKnown RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 YBEYP58557 167 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 SLC10A2Q12908 348 aaPredicted RBP13.36□□□□□ -0.27
TPM3-216ENST00000473036 E2F5Q15329 346 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 CYTH1Q15438 398 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 CST6Q15828 149 aa13.36□□□□□ -0.27
TPM3-216ENST00000473036 HADHQ16836 314 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms