RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DOK1Q99704 481 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 HSD17B14Q9BPX1 270 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 EBF4Q9BQW3 602 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 FTHL17Q9BXU8 183 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 IFT122Q9HBG6 1241 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 TMEM8AQ9HCN3 771 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 PCDHB12Q9Y5F1 795 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 SLC30A1Q9Y6M5 507 aa10.27□□□□□ -0.77
APTX-216ENST00000472896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 hCG_1818297A0A087WSY0 165 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TCRBV9S1A1TA0A576 114 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 MED19A0JLT2 244 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 ARHGEF37A1IGU5 675 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 HIDE1A8MVS5 230 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 K7EPI3 171 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PFDN6O15212 129 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PI15O43692 258 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 BANF1O75531 89 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ZBTB11O95625 1053 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 ASGR2P07307 311 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 KCNA2P16389 499 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PROZP22891 400 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 NFKBIAP25963 317 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 SREBF1P36956 1147 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 RXRGP48443 463 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 SERPINB9P50453 376 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ARPC4P59998 168 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CDKL1Q00532 357 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 GCNT1Q02742 428 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 RGS21Q2M5E4 152 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TFDP3Q5H9I0 405 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 MFSD4BQ5TF39 518 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 IER5Q5VY09 327 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 C16orf87Q6PH81 154 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TIFABQ6ZNK6 161 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CDHR3Q6ZTQ4 885 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 SETD3Q86TU7 594 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 UBALD2Q8IYN6 164 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TBC1D15Q8TC07 691 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TFB1MQ8WVM0 346 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 KBTBD7Q8WVZ9 684 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 LENG9Q96B70 501 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 C12orf43Q96C57 262 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 CNDP2Q96KP4 475 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 NACC1Q96RE7 527 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 WDR83Q9BRX9 315 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 DRC3Q9H069 523 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 IKZF4Q9H2S9 585 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 POMKQ9H5K3 350 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CWH43Q9H720 699 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 C10orf88Q9H8K7 445 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CYP4F11Q9HBI6 524 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TMEM9Q9P0T7 183 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 XPO7Q9UIA9 1087 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 PCDHGB4Q9UN71 923 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 RNF11Q9Y3C5 154 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PCDHB7Q9Y5E2 793 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PCDHGB5Q9Y5G0 923 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 DCHS1Q96JQ0 3298 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TRIM64BA6NI03 449 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 GOLGA8SH3BPF8 625 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 GOLGA8MH3BSY2 632 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 SLC22A2O15244 555 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 P4HBP07237 508 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 CYP3A4P08684 503 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 GRK2P25098 689 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CYP4A11Q02928 519 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 CYTH1Q15438 398 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 FNDC1Q4ZHG4 1894 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 ANKRD22Q5VYY1 191 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 KAZNQ674X7 775 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ITPRIPL1Q6GPH6 555 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 MFSD7Q6UXD7 560 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 USP37Q86T82 979 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PHF13Q86YI8 300 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 CLVS1Q8IUQ0 354 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 THNSL1Q8IYQ7 743 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ARL10Q8N8L6 244 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PDPRQ8NCN5 879 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TNIP2Q8NFZ5 429 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TMIGD2Q96BF3 282 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PSD2Q9BQI7 771 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 MECRQ9BV79 373 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 GBA3Q9H227 469 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 SMARCAD1Q9H4L7 1026 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 TRNAU1APQ9NX07 287 aaKnown RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 HACD3Q9P035 362 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 MARCOQ9UEW3 520 aaPredicted RBP10.26□□□□□ -0.77
APTX-216ENST00000472896 LIMD1Q9UGP4 676 aa10.26□□□□□ -0.77
APTX-216ENST00000472896 ERGIC3Q9Y282 383 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms