RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 GSRP00390 522 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 PYGMP11217 842 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 CCNCP24863 283 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 SFSWAPQ12872 951 aaKnown RBP20.35■□□□□ 0.85
SF1-213ENST00000472725 PDK1Q15118 436 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 LONP2Q86WA8 852 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 HHIPQ96QV1 700 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 RSPH9Q9H1X1 276 aaPredicted RBP20.35■□□□□ 0.85
SF1-213ENST00000472725 HAUS2Q9NVX0 235 aa20.35■□□□□ 0.85
SF1-213ENST00000472725 TRMT1Q9NXH9 659 aaKnown RBP20.35■□□□□ 0.85
SF1-213ENST00000472725 PACSIN2Q9UNF0 486 aaPredicted RBP20.35■□□□□ 0.85
SF1-213ENST00000472725 J3KR12 359 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 PPP1R12AO14974 1030 aaPredicted RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 SMAD6O43541 496 aaKnown RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 SIN3BO75182 1162 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 ZNF189O75820 626 aaPredicted RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 TMCC1O94876 653 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 SP9P0CG40 484 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 KRT10P13645 584 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 GABRG2P18507 467 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 CNR2P34972 360 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 HSPA9P38646 679 aaKnown RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 RENBPP51606 427 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 COPAP53621 1224 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 SNRPD1P62314 119 aaKnown RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 GBE1Q04446 702 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 BYSLQ13895 437 aaKnown RBP20.34■□□□□ 0.85
SF1-213ENST00000472725 WDR5BQ86VZ2 330 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 TMPRSS6Q8IU80 811 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 BBS5Q8N3I7 341 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 OR8D1Q8WZ84 308 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 P3H4Q92791 437 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 MRGPRX1Q96LB2 322 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 ZSCAN32Q9NX65 697 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 AMACRQ9UHK6 382 aa20.34■□□□□ 0.85
SF1-213ENST00000472725 APOC4-APOC2K7ER74 178 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 K7ERQ8 282 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 AXIN1O15169 862 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 ZNF217O75362 1048 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 ZNF821O75541 412 aaPredicted RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 APOC2P02655 101 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 NUMBP49757 651 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 PPIDQ08752 370 aaKnown RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 NSUN2Q08J23 767 aaKnown RBP eCLIP20.33■□□□□ 0.85
SF1-213ENST00000472725 SLC10A2Q12908 348 aaPredicted RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 HNRNPDQ14103 355 aaKnown RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 CARD16Q5EG05 197 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 SEL1L2Q5TEA6 688 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 KAZNQ674X7 775 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 ZNF776Q68DI1 518 aaPredicted RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 ANO7Q6IWH7 933 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 Q6ZVU0 165 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 TP53INP2Q8IXH6 220 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 ZNF366Q8N895 744 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 TTC13Q8NBP0 860 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 MDGA1Q8NFP4 955 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 OR2AP1Q8NGE2 309 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 OR2A12Q8NGT7 310 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 HMGB4Q8WW32 186 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 PRCCQ92733 491 aaPredicted RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 LRIG1Q96JA1 1093 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 OLFM3Q96PB7 478 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 POLR3BQ9NW08 1133 aaPredicted RBP20.33■□□□□ 0.85
SF1-213ENST00000472725 BCCIPQ9P287 314 aaKnown RBP eCLIP20.33■□□□□ 0.85
SF1-213ENST00000472725 SEPT3Q9UH03 358 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 HCN4Q9Y3Q4 1203 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 PCDHGA2Q9Y5H1 932 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 HEY1Q9Y5J3 304 aa20.33■□□□□ 0.85
SF1-213ENST00000472725 MATN3O15232 486 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 NDUFV2P19404 249 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 CSNK1DP48730 415 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 PTPN5P54829 565 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 RAD51Q06609 339 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 XRCC4Q13426 336 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 LBRQ14739 615 aaKnown RBP20.32■□□□□ 0.84
SF1-213ENST00000472725 GRM3Q14832 879 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 ZNF569Q5MCW4 686 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 FAM46CQ5VWP2 391 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 ZC3H14Q6PJT7 736 aaKnown RBP20.32■□□□□ 0.84
SF1-213ENST00000472725 ARHGAP36Q6ZRI8 547 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 ZBTB44Q8NCP5 570 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 TMIEQ8NEW7 156 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 MAML1Q92585 1016 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 SIPA1Q96FS4 1042 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 GDAP1L1Q96MZ0 367 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 PSKH2Q96QS6 385 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 FAM129BQ96TA1 746 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 TLR10Q9BXR5 811 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 MKRN2Q9H000 416 aaKnown RBP20.32■□□□□ 0.84
SF1-213ENST00000472725 FCF1Q9Y324 198 aaKnown RBP20.32■□□□□ 0.84
SF1-213ENST00000472725 ARIH1Q9Y4X5 557 aaPredicted RBP20.32■□□□□ 0.84
SF1-213ENST00000472725 SHROOM3Q8TF72 1996 aa20.32■□□□□ 0.84
SF1-213ENST00000472725 PLXND1Q9Y4D7 1925 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 HACD1B0YJ81 288 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 C1QTNF3-AMACRE9PGA6 284 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 MTSS1O43312 755 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 POP4O95707 220 aaKnown RBP20.31■□□□□ 0.84
SF1-213ENST00000472725 IGSF6O95976 241 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 PEX11BO96011 259 aa20.31■□□□□ 0.84
SF1-213ENST00000472725 ADH1BP00325 375 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms