RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TRHDEQ9UKU6 1024 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 DNPEPQ9ULA0 475 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 HS3ST2Q9Y278 367 aa17.17■□□□□ 0.34
CCM2-205ENST00000472223 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 NYNRINQ9P2P1 1898 aaKnown RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 PHF2O75151 1096 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 ITGAVP06756 1048 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 RBL1P28749 1068 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 SNRPD1P62314 119 aaKnown RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 RAD51Q06609 339 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 ZNF234Q14588 700 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 STARD3Q14849 445 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 EOGTQ5NDL2 527 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 CCDC137Q6PK04 289 aaKnown RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 RYBPQ8N488 228 aaPredicted RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 PCDH20Q8N6Y1 951 aaKnown RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 PRELID2Q8N945 189 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 FLCNQ8NFG4 579 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 SLC35B2Q8TB61 432 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 SMARCAL1Q9NZC9 954 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 KLHL8Q9P2G9 620 aaPredicted RBP17.16■□□□□ 0.34
CCM2-205ENST00000472223 SIT1Q9Y3P8 196 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 TTLL3Q9Y4R7 772 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 MRFAP1Q9Y605 127 aa17.16■□□□□ 0.34
CCM2-205ENST00000472223 KCNK1O00180 336 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 RNF40O75150 1001 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 TMCC1O94876 653 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 GAS8O95995 478 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 JCHAINP01591 159 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 SRCP12931 536 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 CES1P23141 567 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 NTSR1P30989 418 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 FNTAP49354 379 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 STK19P49842 368 aaPredicted RBP17.15■□□□□ 0.34
CCM2-205ENST00000472223 IFI35P80217 286 aaPredicted RBP17.15■□□□□ 0.34
CCM2-205ENST00000472223 MESP2Q0VG99 397 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 CCINQ13939 588 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 SIX1Q15475 284 aaPredicted RBP17.15■□□□□ 0.34
CCM2-205ENST00000472223 DLG2Q15700 870 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 EGFLAMQ63HQ2 1017 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 ITPRIPL1Q6GPH6 555 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 C4orf22Q6V702 233 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 TRIM67Q6ZTA4 783 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 PID1Q7Z2X4 250 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 C12orf50Q8NA57 414 aaPredicted RBP17.15■□□□□ 0.34
CCM2-205ENST00000472223 USP33Q8TEY7 942 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 MAML1Q92585 1016 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 ISG20Q96AZ6 181 aaKnown RBP17.15■□□□□ 0.34
CCM2-205ENST00000472223 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 TMEM121Q9BTD3 319 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 PDFQ9HBH1 243 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 SLCO3A1Q9UIG8 710 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 STON1Q9Y6Q2 735 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 F5P12259 2224 aa17.15■□□□□ 0.34
CCM2-205ENST00000472223 EDDM13A0A1B0GTR0 161 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 CTAGE15A4D2H0 777 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 RNF103O00237 685 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 ATP9BO43861 1147 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 BNIP3LO60238 219 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 KLF8O95600 359 aaPredicted RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 IGSF6O95976 241 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 MT-CO1P00395 513 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 IFNB1P01574 187 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 EPHX1P07099 455 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 CTAGE8P0CG41 777 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 TARSP26639 723 aaKnown RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 COILP38432 576 aaPredicted RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 MAGEA9P43362 315 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 KIR2DL1P43626 348 aaPredicted RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 MAPK8P45983 427 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 SLC10A7Q0GE19 358 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 PRPSAP1Q14558 356 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 CYP1B1Q16678 543 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 TEX44Q53QW1 395 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 B4GALNT4Q76KP1 1039 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 CTAGE6Q86UF2 777 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 CTAGE4Q8IX94 777 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 KLHL7Q8IXQ5 586 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 PAF1Q8N7H5 531 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 FAM71DQ8N9W8 422 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 SPATA4Q8NEY3 305 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 RPLP0P6Q8NHW5 317 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 LRRN4Q8WUT4 740 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 GDAP1L1Q96MZ0 367 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 PPP1R2P1Q96PQ5 205 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 POLR1EQ9GZS1 481 aaKnown RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 NT5MQ9NPB1 228 aa17.14■□□□□ 0.33
CCM2-205ENST00000472223 FCF1Q9Y324 198 aaKnown RBP17.14■□□□□ 0.33
CCM2-205ENST00000472223 GOLGA6CA6NDK9 693 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 GOLGA6BA6NDN3 693 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
CCM2-205ENST00000472223 ECEL1O95672 775 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 GOLGA6DP0CG33 693 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 CHRNB1P11230 501 aa17.13■□□□□ 0.33
CCM2-205ENST00000472223 NSUN2Q08J23 767 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCM2-205ENST00000472223 GRM3Q14832 879 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms