RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LGALS16A8MUM7 142 aa5□□□□□ -1.61
CD46-213ENST00000471987 EYA2O00167 538 aa5□□□□□ -1.61
CD46-213ENST00000471987 ACTL6BO94805 426 aa5□□□□□ -1.61
CD46-213ENST00000471987 RFC1P35251 1148 aaPredicted RBP5□□□□□ -1.61
CD46-213ENST00000471987 PWP2Q15269 919 aaKnown RBP5□□□□□ -1.61
CD46-213ENST00000471987 GALNTL6Q49A17 601 aa5□□□□□ -1.61
CD46-213ENST00000471987 TTC22Q5TAA0 569 aa5□□□□□ -1.61
CD46-213ENST00000471987 AADACL2Q6P093 401 aa5□□□□□ -1.61
CD46-213ENST00000471987 SERPINA11Q86U17 422 aa5□□□□□ -1.61
CD46-213ENST00000471987 WDR5BQ86VZ2 330 aa5□□□□□ -1.61
CD46-213ENST00000471987 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
CD46-213ENST00000471987 SCN4BQ8IWT1 228 aa5□□□□□ -1.61
CD46-213ENST00000471987 MIGA1Q8NAN2 632 aa5□□□□□ -1.61
CD46-213ENST00000471987 C2CD4CQ8TF44 421 aa5□□□□□ -1.61
CD46-213ENST00000471987 FIZ1Q96SL8 496 aa5□□□□□ -1.61
CD46-213ENST00000471987 RETREG1Q9H6L5 497 aa5□□□□□ -1.61
CD46-213ENST00000471987 DDX31Q9H8H2 851 aaKnown RBP5□□□□□ -1.61
CD46-213ENST00000471987 CHST12Q9NRB3 414 aa5□□□□□ -1.61
CD46-213ENST00000471987 TMLHEQ9NVH6 421 aa5□□□□□ -1.61
CD46-213ENST00000471987 NDUFAF4Q9P032 175 aa5□□□□□ -1.61
CD46-213ENST00000471987 CYSRT1A8MQ03 144 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 PRSS47A8MTI9 375 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 GRID2O43424 1007 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 ITM2AO43736 263 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 KIF1CO43896 1103 aaKnown RBP4.99□□□□□ -1.61
CD46-213ENST00000471987 DDAH2O95865 285 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 ITGB8P26012 769 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 SERPINA4P29622 427 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 AP2B1P63010 937 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 TUBA1BP68363 451 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 TRAF3Q13114 568 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 SLC39A14Q15043 492 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 ZNF718Q3SXZ3 478 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 EFHC1Q5JVL4 640 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 DGAT2L7PQ6IED9 249 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 PGBD2Q6P3X8 592 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 GGT6Q6P531 493 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 KLHL17Q6TDP4 642 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 FOXP4Q8IVH2 680 aaPredicted RBP4.99□□□□□ -1.61
CD46-213ENST00000471987 TEX45Q8NA69 505 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 SEPSECSQ9HD40 501 aaKnown RBP4.99□□□□□ -1.61
CD46-213ENST00000471987 PRDM8Q9NQV8 689 aa4.99□□□□□ -1.61
CD46-213ENST00000471987 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 SERPINI2O75830 405 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 DDNO94850 711 aaPredicted RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 CLDN7O95471 211 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 DAOP14920 347 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 RPS6KA3P51812 740 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 DCTN1Q14203 1278 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 ZNF672Q499Z4 452 aaPredicted RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 HSP90AB2PQ58FF8 381 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 FAM76BQ5HYJ3 339 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 ATG9BQ674R7 924 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 NCAPH2Q6IBW4 605 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 WBP2NLQ6ICG8 309 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 CCDC117Q8IWD4 279 aaPredicted RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 PTGR2Q8N8N7 351 aaPredicted RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 C3orf49Q96BT1 292 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 IGSF21Q96ID5 467 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 TEFMQ96QE5 360 aaKnown RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 ELAC2Q9BQ52 826 aaKnown RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 PABPC3Q9H361 631 aaKnown RBP4.98□□□□□ -1.61
CD46-213ENST00000471987 OCIAD1Q9NX40 245 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 KLQ9UEF7 1012 aa4.98□□□□□ -1.61
CD46-213ENST00000471987 SCN5AQ14524 2016 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 LINC01553A4QN01 128 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 SYT5O00445 386 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 SYN3O14994 580 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 SKAP2O75563 359 aaPredicted RBP4.97□□□□□ -1.61
CD46-213ENST00000471987 KRT36O76013 467 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 SNRNP70P08621 437 aaKnown RBP4.97□□□□□ -1.61
CD46-213ENST00000471987 CYP4B1P13584 511 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
CD46-213ENST00000471987 SKIV2L2P42285 1042 aaKnown RBP4.97□□□□□ -1.61
CD46-213ENST00000471987 POU5F1BQ06416 359 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 TMC8Q8IU68 726 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 SCAMP5Q8TAC9 235 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 CLPBQ9H078 707 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 IL25Q9H293 177 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 ABHD16BQ9H3Z7 469 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 AGO1Q9UL18 857 aaKnown RBP4.97□□□□□ -1.61
CD46-213ENST00000471987 RCE1Q9Y256 329 aa4.97□□□□□ -1.61
CD46-213ENST00000471987 A0A087WV62 115 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 IGLV5-52A0A0A0MRZ9 124 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 DDTLA6NHG4 134 aaPredicted RBP4.96□□□□□ -1.62
CD46-213ENST00000471987 ERVV-2B6SEH9 535 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 PRC1O43663 620 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 GAS8-AS1O95177 125 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 LYL1P12980 280 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 CHN1P15882 459 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 DPP6P42658 865 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 PATL1Q86TB9 770 aaKnown RBP4.96□□□□□ -1.62
CD46-213ENST00000471987 SCAIQ8N9R8 606 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 TMEM18Q96B42 140 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 ACAD9Q9H845 621 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms