RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 LDOC1O95751 146 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-213ENST00000471978 RXRGP48443 463 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 COPB1P53618 953 aaKnown RBP23.03■■□□□ 1.28
C9orf3-213ENST00000471978 GNA12Q03113 381 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 OVGP1Q12889 678 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 BNIP3Q12983 259 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 ARL13BQ3SXY8 428 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 ARSIQ5FYB1 569 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 TRIM72Q6ZMU5 477 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 MARCH9Q86YJ5 346 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 DRC7Q8IY82 874 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 EID2Q8N6I1 236 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 GRIN3AQ8TCU5 1115 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 CNDP2Q96KP4 475 aaKnown RBP23.03■■□□□ 1.28
C9orf3-213ENST00000471978 PCMTD1Q96MG8 357 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-213ENST00000471978 OR12D3Q9UGF7 316 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 CA5BQ9Y2D0 317 aa23.03■■□□□ 1.28
C9orf3-213ENST00000471978 DOCK4Q8N1I0 1966 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 A0A1W2PQU0 124 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 RNF103O00237 685 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ENC1O14682 589 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ZNF821O75541 412 aaPredicted RBP23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ZMPSTE24O75844 475 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ADRA1BP35368 520 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 SERPINH1P50454 418 aaKnown RBP23.02■■□□□ 1.28
C9orf3-213ENST00000471978 SLC20A2Q08357 652 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 SYCP1Q15431 976 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 SMAD1Q15797 465 aaKnown RBP23.02■■□□□ 1.28
C9orf3-213ENST00000471978 NEK5Q6P3R8 708 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 SASS6Q6UVJ0 657 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 DHRS13Q6UX07 377 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 DPY19L3Q6ZPD9 716 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ERN2Q76MJ5 926 aaKnown RBP23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ANKRD20A12PQ8NF67 263 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 JOSD2Q8TAC2 188 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 MDM1Q8TC05 714 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 KLK6Q92876 244 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 GBP4Q96PP9 640 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 CEP44Q9C0F1 390 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 ANO10Q9NW15 660 aa23.02■■□□□ 1.28
C9orf3-213ENST00000471978 COL5A1P20908 1838 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-213ENST00000471978 C2CD4BA6NLJ0 364 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 SLC31A1O15431 190 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 LEFTY1O75610 366 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 GJB6O95452 261 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 UNGP13051 313 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-213ENST00000471978 PRLRP16471 622 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 NSFP46459 744 aaKnown RBP23.01■■□□□ 1.27
C9orf3-213ENST00000471978 DNA2P51530 1060 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 RWDD4Q6NW29 188 aaKnown RBP23.01■■□□□ 1.27
C9orf3-213ENST00000471978 HORMAD1Q86X24 394 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 NEK11Q8NG66 645 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 KLHDC7BQ96G42 594 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 PPP1R16AQ96I34 528 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 PCDHB18PQ96TA0 734 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 HDAC8Q9BY41 377 aa23.01■■□□□ 1.27
C9orf3-213ENST00000471978 LIMA1Q9UHB6 759 aaKnown RBP23.01■■□□□ 1.27
C9orf3-213ENST00000471978 FAM149AA5PLN7 773 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 PTPN9P43378 593 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 ARF5P84085 180 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 MYL5Q02045 173 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 NRG1Q02297 640 aaPredicted RBP23■■□□□ 1.27
C9orf3-213ENST00000471978 DNAJC3Q13217 504 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 ZNF284Q2VY69 593 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 MANEALQ5VSG8 457 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 STRADAQ7RTN6 431 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 PCDH20Q8N6Y1 951 aaKnown RBP23■■□□□ 1.27
C9orf3-213ENST00000471978 TMEM145Q8NBT3 493 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 MYOCQ99972 504 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 OSBPL2Q9H1P3 480 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 ADAM22Q9P0K1 906 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 PCDHGA1Q9Y5H4 931 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 WASF2Q9Y6W5 498 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 CELSR3Q9NYQ7 3312 aa23■■□□□ 1.27
C9orf3-213ENST00000471978 DOCK9Q9BZ29 2069 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 LGALS16A8MUM7 142 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 PCDH8O95206 1070 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 KRT3P12035 628 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 ACVRL1P37023 503 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 UBXN1Q04323 297 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 PTP4A2Q12974 167 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 CLEC16AQ2KHT3 1053 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 CARD16Q5EG05 197 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 SFMBT2Q5VUG0 894 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 FAM172AQ8WUF8 416 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 CENPIQ92674 756 aaPredicted RBP22.99■■□□□ 1.27
C9orf3-213ENST00000471978 HEPHQ9BQS7 1158 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 NDFIP2Q9NV92 336 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 FCF1Q9Y324 198 aaKnown RBP22.99■■□□□ 1.27
C9orf3-213ENST00000471978 ACTL7AQ9Y615 435 aa22.99■■□□□ 1.27
C9orf3-213ENST00000471978 FAM72CH0Y354 149 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 THEGLP0DJG4 465 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 RHOQP17081 205 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 CDK11BP21127 795 aaKnown RBP22.98■■□□□ 1.27
C9orf3-213ENST00000471978 AKT2P31751 481 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 RFC1P35251 1148 aaPredicted RBP22.98■■□□□ 1.27
C9orf3-213ENST00000471978 ETFBP38117 255 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 MAPKAPK2P49137 400 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 HDAC4P56524 1084 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 STX1AQ16623 288 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms