RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TMEM35BQ8NCS4 154 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 OR6K2Q8NGY2 324 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 GRIN3AQ8TCU5 1115 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 RXFP2Q8WXD0 754 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 OR8D1Q8WZ84 308 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 PGAP3Q96FM1 320 aaPredicted RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 SPAG5Q96R06 1193 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 ACE2Q9BYF1 805 aaPredicted RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 NOL6Q9H6R4 1146 aaKnown RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 FBRSQ9HAH7 460 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 FZD4Q9ULV1 537 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
USP48-207ENST00000471752 BOLA1Q9Y3E2 137 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 PIEZO2Q9H5I5 2752 aa8.27□□□□□ -1.09
USP48-207ENST00000471752 TENM4Q6N022 2769 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 A0A1W2PQU0 124 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 KPNA3O00505 521 aaPredicted RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 FLRT2O43155 660 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 TEX33O43247 280 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 TNFSF14O43557 240 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 LEFTY1O75610 366 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 EPHA8P29322 1005 aaPredicted RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 RFC1P35251 1148 aaPredicted RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 ADRA1BP35368 520 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 GRK6P43250 576 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 CCT8P50990 548 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 DNA2P51530 1060 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 COPB1P53618 953 aaKnown RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 SULT2A1Q06520 285 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 SLC12A1Q13621 1099 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 NCAPHQ15003 741 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 NLRP14Q86W24 1093 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 SLC22A18ASQ8N1D0 253 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 BAP1Q92560 729 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 CNDP2Q96KP4 475 aaKnown RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 BMFQ96LC9 184 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 C1orf74Q96LT6 269 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 BBC3Q96PG8 261 aaPredicted RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 C11orf70Q9BRQ4 267 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 TAS2R14Q9NYV8 317 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 DNAI1Q9UI46 699 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 KLF15Q9UIH9 416 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 SCML1Q9UN30 329 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 LHX6Q9UPM6 363 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 APOBEC2Q9Y235 224 aaKnown RBP8.26□□□□□ -1.09
USP48-207ENST00000471752 HS3ST2Q9Y278 367 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 ITM2BQ9Y287 266 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 PTPRBP23467 1997 aa8.26□□□□□ -1.09
USP48-207ENST00000471752 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 LY6G6EA0A0G2JKS1 128 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TCRBV5S1A1TA0A578 114 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 POM121BA6NF01 834 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 C2CD4BA6NLJ0 364 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 ENC1O14682 589 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 INSIG1O15503 277 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SIGLEC6O43699 453 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 NEBLO76041 1014 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 LDOC1O95751 146 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 ITGAVP06756 1048 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 UNGP13051 313 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 MMP8P22894 467 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 ITPKBP27987 946 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 OR1E1P30953 314 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SOX5P35711 763 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 HDAC4P56524 1084 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 BPIFB4P59827 614 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 RPL7AP62424 266 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 CDR2Q01850 454 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 OGDHQ02218 1023 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SEMG2Q02383 582 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 HNRNPDQ14103 355 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 SUZ12Q15022 739 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 E2F5Q15329 346 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SYCP1Q15431 976 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SMAD1Q15797 465 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 BRMS1LQ5PSV4 323 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 ATXN7L2Q5T6C5 722 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 MANEALQ5VSG8 457 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 SFMBT2Q5VUG0 894 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 NAPEPLDQ6IQ20 393 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 C22orf39Q6P5X5 142 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 WDR59Q6PJI9 974 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 GCNT7Q6ZNI0 430 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 CLEC17AQ6ZS10 378 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 RBM43Q6ZSC3 357 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 ARFGAP1Q8N6T3 406 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 ZNF557Q8N988 423 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 TMEM145Q8NBT3 493 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 OR13H1Q8NG92 308 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TSC1Q92574 1164 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 CENPIQ92674 756 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 FAM81BQ96LP2 452 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms