RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SH2D3CQ8N5H7 860 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 OR2A12Q8NGT7 310 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 TFB1MQ8WVM0 346 aaKnown RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 RPL10LQ96L21 214 aaKnown RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ZNF599Q96NL3 588 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 SMIM14Q96QK8 99 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 TRIB3Q96RU7 358 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 FAM129BQ96TA1 746 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 HINFPQ9BQA5 517 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 BRD8Q9H0E9 1235 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 BRD9Q9H8M2 597 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ATP13A1Q9HD20 1204 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ZDHHC18Q9NUE0 388 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 THAP10Q9P2Z0 257 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 ERVW-1Q9UQF0 538 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 FCF1Q9Y324 198 aaKnown RBP10.07□□□□□ -0.8
SF3A1-207ENST00000471342 PIAS3Q9Y6X2 628 aa10.07□□□□□ -0.8
SF3A1-207ENST00000471342 A0A1W2PQF6 199 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 ARHGAP42A6NI28 874 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TTC34A8MYJ7 566 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TRAFD1O14545 582 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MCF2LO15068 1137 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 SPINT1O43278 529 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CTIFO43310 598 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TMCC1O94876 653 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TMEM63AO94886 807 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CYBBP04839 570 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CTSLP07711 333 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 DLDP09622 509 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MYBL2P10244 700 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CCNB1P14635 433 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MX2P20592 715 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 COL9A1P20849 921 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 PRKCHP24723 683 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TARSP26639 723 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 STIP1P31948 543 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GKP32189 559 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 SERPINB6P35237 376 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GRIA1P42261 906 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GRIA2P42262 883 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 IL12RB1P42701 662 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 RPL21P46778 160 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MAXP61244 160 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 SLC7A5Q01650 507 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 KDSRQ06136 332 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CDH18Q13634 790 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 ZNF234Q14588 700 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 KCNJ11Q14654 390 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 PTPRRQ15256 657 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GRAMD4Q6IC98 578 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MICALCLQ6ZW33 695 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 PLPP6Q8IY26 295 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GJD3Q8N144 294 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 AHI1Q8N157 1196 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 NAT8LQ8N9F0 302 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CHST14Q8NCH0 376 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 USP33Q8TEY7 942 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MAIP1Q8WWC4 291 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 CPT1BQ92523 772 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 ACDQ96AP0 544 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 ISG20Q96AZ6 181 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 IMP4Q96G21 291 aaKnown RBP10.06□□□□□ -0.8
SF3A1-207ENST00000471342 SPATA13Q96N96 652 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 FCRL5Q96RD9 977 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 PNKPQ96T60 521 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 GDF3Q9NR23 364 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 DEC1Q9P2X7 70 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 WNT16Q9UBV4 365 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 MUTYHQ9UIF7 546 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 SORCS3Q9UPU3 1222 aa10.06□□□□□ -0.8
SF3A1-207ENST00000471342 TICRRQ7Z2Z1 1910 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 H7C0C1 242 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 CBX4O00257 560 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 KCNN4O15554 427 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 PDGFBP01127 241 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 ATXN1LP0C7T5 689 aaKnown RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 MAGEA3P43357 314 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 TNFRSF4P43489 277 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 ATP5OP48047 213 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 ECT2LQ008S8 904 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 DSC2Q02487 901 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 NSUN2Q08J23 767 aaKnown RBP eCLIP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 SEMA5AQ13591 1074 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 PON2Q15165 354 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 CDKN3Q16667 212 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 P3H1Q32P28 736 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 ATXN7L2Q5T6C5 722 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 RNASEH2BQ5TBB1 312 aaKnown RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 KIAA1211LQ6NV74 962 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 DARS2Q6PI48 645 aaKnown RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 NCEH1Q6PIU2 408 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 CDKL3Q8IVW4 592 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-207ENST00000471342 YAF2Q8IY57 180 aa10.05□□□□□ -0.8
SF3A1-207ENST00000471342 CBARPQ8N350 705 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms