RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SOAT2O75908 522 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CD72P21854 359 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 PGFP49763 221 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 GDF10P55107 478 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CDH4P55283 916 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 OXCT1P55809 520 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 MTAPQ13126 283 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 HNRNPDQ14103 355 aaKnown RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 TRADDQ15628 312 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 TUBB8Q3ZCM7 444 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 DGKKQ5KSL6 1271 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 ADGRF1Q5T601 910 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 NPNTQ6UXI9 565 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CYS1Q717R9 158 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 SETD3Q86TU7 594 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 MFSD6LQ8IWD5 586 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 GSPT2Q8IYD1 628 aaKnown RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CCDC13Q8IYE1 715 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 SPEM1Q8N4L4 309 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CPT1BQ92523 772 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 MAML1Q92585 1016 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 PGM2Q96G03 612 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 P2RY11Q96G91 374 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 ASB16Q96NS5 453 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 RBM15Q96T37 977 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CORO1BQ9BR76 489 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CCDC77Q9BR77 488 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 CCSER2Q9H7U1 834 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 TRPV4Q9HBA0 871 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 HEBP1Q9NRV9 189 aa9.35□□□□□ -0.91
PTPRE-207ENST00000471218 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 MTF2Q9Y483 593 aaPredicted RBP9.35□□□□□ -0.91
PTPRE-207ENST00000471218 A0A1B0GVM2 712 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TCAF2A6NFQ2 919 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 GFRA2O00451 464 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 SLC30A4O14863 429 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MATN3O15232 486 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 RIPK2O43353 540 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 STC2O76061 302 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 SUN1O94901 812 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 PAPSS2O95340 614 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ADRB1P08588 477 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MYZAPP0CAP1 466 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TACR2P21452 398 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ATP5DP30049 168 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 HOXA6P31267 233 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 PHBP35232 272 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MAGEA3P43357 314 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 RENBPP51606 427 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 SIM2Q14190 667 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 FRG1Q14331 258 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 RFTN1Q14699 578 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 STAT4Q14765 748 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 UAP1Q16222 522 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CSRP2Q16527 193 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TEX44Q53QW1 395 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ANKRD20A2Q5SQ80 823 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ANKRD20A1Q5TYW2 823 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 EMC10Q5UCC4 262 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ANKRD20A3Q5VUR7 823 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TANGO2Q6ICL3 276 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TMEM150AQ86TG1 271 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CHSY1Q86X52 802 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TDRPQ86YL5 185 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MIB1Q86YT6 1006 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TMC8Q8IU68 726 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CCDC117Q8IWD4 279 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ARHGAP12Q8IWW6 846 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CPXM2Q8N436 756 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 NPWQ8N729 165 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 GLIS1Q8NBF1 620 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CCNYQ8ND76 341 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ING5Q8WYH8 240 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 TEKT5Q96M29 485 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 IL12RB2Q99665 862 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 FAM118BQ9BPY3 351 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 LRRC3Q9BY71 257 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 CNTNAP3Q9BZ76 1288 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 MAGEH1Q9H213 219 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 GBA3Q9H227 469 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 RAB6BQ9NRW1 208 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 HCFC1R1Q9NWW0 138 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ZNF212Q9UDV6 495 aa9.34□□□□□ -0.91
PTPRE-207ENST00000471218 LSM7Q9UK45 103 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 NDRG2Q9UN36 371 aaKnown RBP9.34□□□□□ -0.91
PTPRE-207ENST00000471218 ARHGAP26Q9UNA1 814 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms