RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 ILKQ13418 452 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 ELAVL3Q14576 367 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 DCAF6Q58WW2 860 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 SLC45A4Q5BKX6 768 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 HES3Q5TGS1 186 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 NAPEPLDQ6IQ20 393 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 FBXL19Q6PCT2 694 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 KANSL1Q7Z3B3 1105 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CCAR2Q8N163 923 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CACTIN-AS1Q8N1I8 211 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 SNIP1Q8TAD8 396 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CPA5Q8WXQ8 436 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 CTNNBL1Q8WYA6 563 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 SERAC1Q96JX3 654 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 DCBLD2Q96PD2 775 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 PRORYQ9H606 182 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 TAS2R14Q9NYV8 317 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 SLCO3A1Q9UIG8 710 aa9.32□□□□□ -0.92
SF3A1-206ENST00000471037 GOLGA4Q13439 2230 aaKnown RBP9.32□□□□□ -0.92
SF3A1-206ENST00000471037 BTNL10A8MVZ5 291 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TLR4O00206 839 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 SLC7A4O43246 635 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 KRT86O43790 486 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 IGLV3-25P01717 112 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TMEM253P0C7T8 217 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 MSNP26038 577 aaKnown RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ITPKBP27987 946 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 MZF1P28698 734 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 DRD3P35462 400 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 NUDT1P36639 197 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ACADSBP45954 432 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 CLDN6P56747 220 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 GSCP56915 257 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 PPP2CBP62714 309 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 PPP2CAP67775 309 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 SULT2A1Q06520 285 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 OVGP1Q12889 678 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TARDBPQ13148 414 aaKnown RBP eCLIP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 PDCLQ13371 301 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 SLC12A1Q13621 1099 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 RNF219Q5W0B1 726 aaPredicted RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TAC4Q86UU9 113 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ERICH1Q86X53 443 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 MCOLN2Q8IZK6 566 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 APCDD1Q8J025 514 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 CFAP52Q8N1V2 620 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 WDTC1Q8N5D0 677 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 EID2Q8N6I1 236 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 MFSD2AQ8NA29 543 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 OR14C36Q8NHC7 312 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ADAM32Q8TC27 787 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 PPP1R13BQ96KQ4 1090 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 BTN2A3PQ96KV6 586 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 TRIM62Q9BVG3 475 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 ADAM22Q9P0K1 906 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 XPO7Q9UIA9 1087 aaKnown RBP9.31□□□□□ -0.92
SF3A1-206ENST00000471037 NAALADL1Q9UQQ1 740 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 DMTF1Q9Y222 760 aa9.31□□□□□ -0.92
SF3A1-206ENST00000471037 A0A0A6YYK5 440 aaPredicted RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 RRP8O43159 456 aaKnown RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 PLRG1O43660 514 aaKnown RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 MAGEC1O60732 1142 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 MOCS2O96007 188 aaPredicted RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 IL1BP01584 269 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 APOEP02649 317 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 CKMT2P17540 419 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 TACR2P21452 398 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 ACP1P24666 158 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 NNMTP40261 264 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 GABRB2P47870 512 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 STK19P49842 368 aaPredicted RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 PLK1P53350 603 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 SEMG2Q02383 582 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 PTP4A2Q12974 167 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 BNIP3Q12983 259 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 EIF4EBP2Q13542 120 aaPredicted RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 PTPN20Q4JDL3 420 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 SYPL2Q5VXT5 272 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 RAP1GAP2Q684P5 730 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 LRRC69Q6ZNQ3 347 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 TMEM110Q86TL2 294 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 TRIM69Q86WT6 500 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 CHSY1Q86X52 802 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 SPATS2Q86XZ4 545 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms