RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 GCNAQ96QF7 691 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 FEM1AQ9BSK4 669 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SPON2Q9BUD6 331 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LMAN2LQ9H0V9 348 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 NT5MQ9NPB1 228 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 MED4Q9NPJ6 270 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 RABGEF1Q9UJ41 708 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 INTS6Q9UL03 887 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 MRPS23Q9Y3D9 190 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SH3BP1Q9Y3L3 701 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 E2F8A0AVK6 867 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 SMIM23A6NLE4 172 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TRIM24O15164 1050 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 EIF3HO15372 352 aaKnown RBP eCLIP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 MT-CO1P00395 513 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 RHOCP08134 193 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 ABHD2P08910 425 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TPH1P17752 444 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 MGAT1P26572 445 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CD70P32970 193 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CSKP41240 450 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CHRNA4P43681 627 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 IFNAR2P48551 515 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 SESN2P58004 480 aaPredicted RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CDK16Q00536 496 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 USP4Q13107 963 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 MSLNQ13421 630 aaPredicted RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 LBRQ14739 615 aaKnown RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CCDC38Q502W7 563 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 RARS2Q5T160 578 aaKnown RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CERCAMQ5T4B2 595 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 MARC1Q5VT66 337 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TIGD7Q6NT04 549 aaPredicted RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 LRRC8BQ6P9F7 803 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 KDELC1Q6UW63 502 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CHRDL2Q6WN34 429 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 UNC5AQ6ZN44 842 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 C3orf62Q6ZUJ4 267 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 NPAS3Q8IXF0 933 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 HJURPQ8NCD3 748 aaPredicted RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 VOPP1Q96AW1 172 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TADA1Q96BN2 335 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 IMP4Q96G21 291 aaKnown RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TMEM109Q9BVC6 243 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 SP110Q9HB58 689 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CASS4Q9NQ75 786 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 SMYD2Q9NRG4 433 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 SYBUQ9NX95 663 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 CLEC1BQ9P126 229 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 WNT6Q9Y6F9 365 aa8.47□□□□□ -1.05
GTF3A-206ENST00000470606 KIF26AQ9ULI4 1882 aaPredicted RBP8.47□□□□□ -1.05
GTF3A-206ENST00000470606 TCRBV9S1A1TA0A576 114 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 OTOL1A6NHN0 477 aaPredicted RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 CXorf49A8MYA2 514 aaPredicted RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 H0Y626 953 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 K7ERQ8 282 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 CBX4O00257 560 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 POLR3GO15318 223 aaPredicted RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 KDELR3O43731 214 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 PMPCBO75439 489 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 FGF19O95750 216 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 MLNP12872 115 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 DDX6P26196 483 aaKnown RBP eCLIP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 MMP13P45452 471 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 RENBPP51606 427 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 CBX1P83916 185 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 PPARDQ03181 441 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 MESP2Q0VG99 397 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 LMAN2Q12907 356 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 CYTH1Q15438 398 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 KRT71Q3SY84 523 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 FAM78AQ5JUQ0 283 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 IL31Q6EBC2 164 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 ITPRIPL1Q6GPH6 555 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 CES3Q6UWW8 571 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 TMEM184AQ6ZMB5 413 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 ZNF354CQ86Y25 554 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 RNF135Q8IUD6 432 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 ADGRG2Q8IZP9 1017 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 LEMD2Q8NC56 503 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 FBF1Q8TES7 1133 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 DDI1Q8WTU0 396 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 MYLIPQ8WY64 445 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 FGF13Q92913 245 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 ZNF778Q96MU6 729 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 XPO6Q96QU8 1125 aaKnown RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 EBNA1BP2Q99848 306 aaKnown RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 FERMT1Q9BQL6 677 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 SLC25A51Q9H1U9 297 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 TTYH1Q9H313 450 aaPredicted RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 RETREG1Q9H6L5 497 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 VPS37BQ9H9H4 285 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 PIDD1Q9HB75 910 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 XAB2Q9HCS7 855 aaKnown RBP8.46□□□□□ -1.05
GTF3A-206ENST00000470606 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 IL1RAPL1Q9NZN1 696 aa8.46□□□□□ -1.05
GTF3A-206ENST00000470606 LSM7Q9UK45 103 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms