RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 RECQLP46063 649 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 KIF19Q2TAC6 998 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 SKOR2Q2VWA4 1001 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 POM121L1PQ3SYA9 428 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 AGBL4Q5VU57 503 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 TBC1D3GQ6DHY5 549 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 TBC1D3CQ6IPX1 549 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 ADAT2Q7Z6V5 191 aaKnown RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 TBC1D3Q8IZP1 549 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 PCDH20Q8N6Y1 951 aaKnown RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 TMIEQ8NEW7 156 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 TNKS2Q9H2K2 1166 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 IL21RQ9HBE5 538 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 ANGPTL2Q9UKU9 493 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 FNDC3AQ9Y2H6 1198 aaKnown RBP18.66■□□□□ 0.58
PHGDH-204ENST00000469443 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
PHGDH-204ENST00000469443 KPNA3O00505 521 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-204ENST00000469443 LATO43561 262 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 SH3BP5O60239 455 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 RAMP2O60895 175 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 ZNF821O75541 412 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-204ENST00000469443 CD160O95971 181 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 PSMA2P25787 234 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 EPHB2P29323 1055 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 PPP2CBP62714 309 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 PPP2CAP67775 309 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 HNRNPDQ14103 355 aaKnown RBP18.65■□□□□ 0.58
PHGDH-204ENST00000469443 LAYNQ6UX15 382 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 DNAAF5Q86Y56 855 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 RTL3Q8N8U3 475 aaKnown RBP18.65■□□□□ 0.58
PHGDH-204ENST00000469443 CHST14Q8NCH0 376 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 SLC6A18Q96N87 628 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 EPAS1Q99814 870 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 TM7SF3Q9NS93 570 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 IL36AQ9UHA7 158 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 HPCAL4Q9UM19 191 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 CHD8Q9HCK8 2581 aa18.65■□□□□ 0.58
PHGDH-204ENST00000469443 TMEM191CA6NGB0 347 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 VILLO15195 856 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 CTSKP43235 329 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 GEMIN4P57678 1058 aaKnown RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 SHC2P98077 582 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 CCDC15Q0P6D6 951 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 POLD3Q15054 466 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 DPY19L3Q6ZPD9 716 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 PRPF39Q86UA1 669 aaKnown RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 NAXDQ8IW45 347 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 ARRDC3Q96B67 414 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 SKA1Q96BD8 255 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 ZNF653Q96CK0 615 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 IQCDQ96DY2 449 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 TRIM11Q96F44 468 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 CATSPERBQ9H7T0 1116 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 DYRK4Q9NR20 520 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 AASDHPPTQ9NRN7 309 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 CNOT8Q9UFF9 292 aaKnown RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 FCF1Q9Y324 198 aaKnown RBP18.64■□□□□ 0.57
PHGDH-204ENST00000469443 PCDHGB2Q9Y5G2 931 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 ACTL7AQ9Y615 435 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 SCINQ9Y6U3 715 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 WASF2Q9Y6W5 498 aa18.64■□□□□ 0.57
PHGDH-204ENST00000469443 SPAARA0A1B0GVQ0 90 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 WASH4PA8MWX3 477 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 CREB3O43889 395 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 NUDT1P36639 197 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 DNA2P51530 1060 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 C21orf59P57076 290 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 TAS2R38P59533 333 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 ZBED6P86452 979 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 TDRD12Q587J7 1177 aaKnown RBP18.63■□□□□ 0.57
PHGDH-204ENST00000469443 CARD16Q5EG05 197 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 PIP5KL1Q5T9C9 394 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 HGSNATQ68CP4 663 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 GRIN3AQ8TCU5 1115 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 FNIP1Q8TF40 1166 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 ISG20Q96AZ6 181 aaKnown RBP18.63■□□□□ 0.57
PHGDH-204ENST00000469443 PPP1R16AQ96I34 528 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 SERAC1Q96JX3 654 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 CAMK1GQ96NX5 476 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 HEPHQ9BQS7 1158 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 ISCUQ9H1K1 167 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 NOL6Q9H6R4 1146 aaKnown RBP18.63■□□□□ 0.57
PHGDH-204ENST00000469443 PREBQ9HCU5 417 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 IFNKQ9P0W0 207 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
PHGDH-204ENST00000469443 BZW2Q9Y6E2 419 aaKnown RBP18.63■□□□□ 0.57
PHGDH-204ENST00000469443 ANKRD36A6QL64 1941 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 A0A1W2PR77 199 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 ZSCAN5CA6NGD5 496 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 RNF103O00237 685 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 FGF10O15520 208 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 KDELR3O43731 214 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 LEFTY1O75610 366 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 RNF8O76064 485 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 WNT1P04628 370 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 MYBL1P10243 752 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 CD38P28907 300 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms