RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KIAA0408Q6ZU52 694 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 TMC7Q7Z402 723 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CCDC91Q7Z6B0 441 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 YTHDF3Q7Z739 585 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 TP53INP2Q8IXH6 220 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 FAM217AQ8IXS0 508 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CACNA2D3Q8IZS8 1091 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 AGGF1Q8N302 714 aaeCLIP10.36□□□□□ -0.752e-10■□□□□ 10.8
MSH5-213ENST00000468136 CPXM2Q8N436 756 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CCDC33Q8N5R6 958 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 BANPQ8N9N5 519 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 HJURPQ8NCD3 748 aaPredicted RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 RAB3IL1Q8TBN0 382 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 MDM1Q8TC05 714 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 CALML6Q8TD86 181 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 ZNF473Q8WTR7 871 aaKnown RBP10.36□□□□□ -0.75
MSH5-213ENST00000468136 IGSF8Q969P0 613 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 TADA1Q96BN2 335 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 HMCESQ96FZ2 354 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 KLHL5Q96PQ7 755 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 HTATIP2Q9BUP3 242 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
MSH5-213ENST00000468136 TRAV19A0A0A6YYK7 116 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 TRIM49D1C9J1S8 452 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 C5orf67F2Z3F1 127 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 COPEO14579 308 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 TGM5O43548 720 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 TLL1O43897 1013 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 CNTN5O94779 1100 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 HLA-DQB2P05538 268 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 RHOCP08134 193 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 GSTA1P08263 222 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 HMBSP08397 361 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
MSH5-213ENST00000468136 DRD4P21917 467 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 GRIA1P42261 906 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 KCNQ1P51787 676 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 ZNF235Q14590 738 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 ITIH4Q14624 930 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 INO80DQ53TQ3 878 aaPredicted RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 NADSYN1Q6IA69 706 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 KIAA0930Q6ICG6 404 aaPredicted RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 KYAT3Q6YP21 454 aaKnown RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 TFAP2DQ7Z6R9 452 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 GALNT7Q86SF2 657 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 TAX1BP1Q86VP1 789 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 ZNF354CQ86Y25 554 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 MPP5Q8N3R9 675 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 MRPL43Q8N983 215 aaKnown RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 ANKRD42Q8N9B4 389 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 KREMEN2Q8NCW0 462 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 USP13Q92995 863 aaPredicted RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 ISL2Q96A47 359 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 OXNAD1Q96HP4 312 aaPredicted RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 FEM1CQ96JP0 617 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 PSKH2Q96QS6 385 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 GORASP1Q9BQQ3 440 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 FAM167BQ9BTA0 163 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 CEP41Q9BYV8 373 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 ATP13A1Q9HD20 1204 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 NDFIP2Q9NV92 336 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 DCDC2Q9UHG0 476 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 MID2Q9UJV3 735 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 DOCK4Q8N1I0 1966 aa10.35□□□□□ -0.75
MSH5-213ENST00000468136 MYO18AQ92614 2054 aaKnown RBP10.35□□□□□ -0.75
MSH5-213ENST00000468136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 KLF11O14901 512 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SIN3BO75182 1162 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 IL1BP01584 269 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 MPOP05164 745 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 FGF1P05230 155 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 C8AP07357 584 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 VIMP08670 466 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 SERPINF2P08697 491 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 LINC00271P0C7V0 271 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 HOXB8P17481 243 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 HDCP19113 662 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 CRHR1P34998 444 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 MAPK8P45983 427 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SERPINH1P50454 418 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 EPHA5P54756 1037 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 WNT3AP56704 352 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SMAD3P84022 425 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SLC12A1Q13621 1099 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 ARHGAP15Q53QZ3 475 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 TTC19Q6DKK2 380 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 KDELC1Q6UW63 502 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 PACS1Q6VY07 963 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 Q6ZNB5 142 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SH2D5Q6ZV89 423 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 HTR3DQ70Z44 454 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms