RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ITPKBP27987 946 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 OR1E1P30953 314 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 EIF2S3P41091 472 aaKnown RBP17.65■□□□□ 0.42
TRIM56-203ENST00000467847 RECQLP46063 649 aaPredicted RBP17.65■□□□□ 0.42
TRIM56-203ENST00000467847 INSM1Q01101 510 aaPredicted RBP17.65■□□□□ 0.42
TRIM56-203ENST00000467847 RAPGEF1Q13905 1077 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 RTP5Q14D33 572 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 SLC25A52Q3SY17 297 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 ARSIQ5FYB1 569 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 ACBD5Q5T8D3 534 aaPredicted RBP17.65■□□□□ 0.42
TRIM56-203ENST00000467847 C22orf39Q6P5X5 142 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 LRRC69Q6ZNQ3 347 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 ERN2Q76MJ5 926 aaKnown RBP17.65■□□□□ 0.42
TRIM56-203ENST00000467847 FAM114A1Q8IWE2 563 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 C18orf8Q96DM3 657 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 PPP1R16AQ96I34 528 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 CALN1Q9BXU9 219 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 NDST4Q9H3R1 872 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 KLHL11Q9NVR0 708 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 TMEM51Q9NW97 253 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 IL36AQ9UHA7 158 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 CLCA2Q9UQC9 943 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 PTPRQQ9UMZ3 2332 aa17.65■□□□□ 0.42
TRIM56-203ENST00000467847 TK2O00142 265 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 RNF103O00237 685 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 FFAR2O15552 330 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 RRP8O43159 456 aaKnown RBP17.64■□□□□ 0.41
TRIM56-203ENST00000467847 SRGAP2O75044 1071 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 ENDOD1O94919 500 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
TRIM56-203ENST00000467847 CYP11B1P15538 503 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 HNRNPA2B1P22626 353 aaKnown RBP17.64■□□□□ 0.41
TRIM56-203ENST00000467847 CDH5P33151 784 aaPredicted RBP17.64■□□□□ 0.41
TRIM56-203ENST00000467847 SCNN1AP37088 669 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 GABRB2P47870 512 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 UBE2HP62256 183 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 DAB2P98082 770 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 ERICH1Q86X53 443 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 XYLT1Q86Y38 959 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 OR13H1Q8NG92 308 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 OR7D4Q8NG98 312 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 OR4C6Q8NH72 309 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 RFFLQ8WZ73 363 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 SPON2Q9BUD6 331 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 HDAC8Q9BY41 377 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 UCKL1Q9NWZ5 548 aa17.64■□□□□ 0.41
TRIM56-203ENST00000467847 IGLV3-10A0A075B6K4 115 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 GOLGA8SH3BPF8 625 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 LEFTY1O75610 366 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 FLT3P36888 993 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 CLDN2P57739 230 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 E2F1Q01094 437 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 DRAP1Q14919 205 aaPredicted RBP17.63■□□□□ 0.41
TRIM56-203ENST00000467847 VWA3BQ502W6 1294 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 SEL1L3Q68CR1 1132 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 RETSATQ6NUM9 610 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 ZNF783Q6ZMS7 281 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 DPY19L3Q6ZPD9 716 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 ZNF605Q86T29 641 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 CACTIN-AS1Q8N1I8 211 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 DCBLD1Q8N8Z6 715 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 BAP1Q92560 729 aa17.63■□□□□ 0.41
TRIM56-203ENST00000467847 ZFR2Q9UPR6 939 aaKnown RBP17.63■□□□□ 0.41
TRIM56-203ENST00000467847 ILVBLA1L0T0 632 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 BRINP1O60477 761 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 PIAS2O75928 621 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 SERPINH1P50454 418 aaKnown RBP17.62■□□□□ 0.41
TRIM56-203ENST00000467847 DNA2P51530 1060 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 NEK3P51956 506 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
TRIM56-203ENST00000467847 TMEM259Q4ZIN3 620 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 C2CD6Q53TS8 623 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 HSP90AA4PQ58FG1 418 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 MIIPQ5JXC2 388 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 DPY19L2P1Q6NXN4 242 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 KDM7AQ6ZMT4 941 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 GCNT7Q6ZNI0 430 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 SLC22A18ASQ8N1D0 253 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 MSANTD4Q8NCY6 345 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 CFAP57Q96MR6 1250 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 HAPLN3Q96S86 360 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 TUBGCP2Q9BSJ2 902 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 CEP44Q9C0F1 390 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 ATP13A1Q9HD20 1204 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 FHOD1Q9Y613 1164 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 WASF2Q9Y6W5 498 aa17.62■□□□□ 0.41
TRIM56-203ENST00000467847 A6NNZ2 444 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 PES1O00541 588 aaKnown RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ZNF821O75541 412 aaPredicted RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 LSM8O95777 96 aaKnown RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 MT-CO3P00414 261 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ALPPL2P10696 532 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ADRB3P13945 408 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 RPS21P63220 83 aaKnown RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 SLC20A2Q08357 652 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 KLHDC7AQ5VTJ3 777 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 TRNP1Q6NT89 227 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms