RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CHRNDQ07001 517 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 ALKBH1Q13686 389 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 DENND1BQ6P3S1 775 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 RNF144BQ7Z419 303 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 TMEM217Q8N7C4 229 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 CEP70Q8NHQ1 597 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 ZNF304Q9HCX3 659 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 RIC8AQ9NPQ8 531 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 TXLNGQ9NUQ3 528 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 PDP2Q9P2J9 529 aa4.81□□□□□ -1.64
PRPF40A-205ENST00000467114 CXorf65A6NEN9 183 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 IFITM10A6NMD0 228 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 METTL18O95568 372 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 RXRAP19793 462 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 CIITAP33076 1130 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 GJC1P36383 396 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 RPS6KA3P51812 740 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 NFATC4Q14934 902 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 GXYLT1Q4G148 440 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 C10orf76Q5T2E6 689 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 SYNE3Q6ZMZ3 975 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 TRILQ7L0X0 811 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 TMTC1Q8IUR5 882 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 CPXCR1Q8N123 301 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 IL17REQ8NFR9 667 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 ELP5Q8TE02 316 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 ZSCAN31Q96LW9 406 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 SCLT1Q96NL6 688 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 FRG2BQ96QU4 278 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 SIRT3Q9NTG7 399 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 HIF1ANQ9NWT6 349 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 ARL15Q9NXU5 204 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 UPB1Q9UBR1 384 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 OSGIN2Q9Y236 505 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 LRRFIP2Q9Y608 721 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 MST1RQ04912 1400 aa4.8□□□□□ -1.64
PRPF40A-205ENST00000467114 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 EYA2O00167 538 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 ENTPD1P49961 510 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 TLE2Q04725 743 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 ARL13AQ5H913 290 aaPredicted RBP4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 TTC39AQ5SRH9 613 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 C9orf50Q5SZB4 431 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 TBC1D9BQ66K14 1250 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 NAPEPLDQ6IQ20 393 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 AADACL2Q6P093 401 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 GJB7Q6PEY0 223 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 PARM1Q6UWI2 310 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 KDELC2Q7Z4H8 507 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 KLBQ86Z14 1044 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 BRSK2Q8IWQ3 736 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 KDM1BQ8NB78 822 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 LSM14AQ8ND56 463 aaKnown RBP4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 HDAC7Q8WUI4 952 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 PHF21BQ96EK2 531 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 MAP6D1Q9H9H5 199 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 NOD2Q9HC29 1040 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 RRN3Q9NYV6 651 aa4.79□□□□□ -1.64
PRPF40A-205ENST00000467114 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 A0A1B0GVC2 190 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CLEC18AA5D8T8 446 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 KLKB1P03952 638 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 LCKP06239 509 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 HOXC6P09630 235 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CYP4B1P13584 511 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 RASSF2P50749 326 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 ROR2Q01974 943 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 RPE65Q16518 533 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 WDR45BQ5MNZ6 344 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 Q5PR19 223 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 SH2D4BQ5SQS7 431 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 WASHC2DQ5SRD0 308 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 NADSYN1Q6IA69 706 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 TRIM74Q86UV6 250 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 TRIM73Q86UV7 250 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 GPSM1Q86YR5 675 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 SMAP1Q8IYB5 467 aaPredicted RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 VPS52Q8N1B4 723 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CLEC18CQ8NCF0 446 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 SETD9Q8NE22 299 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 KCNJ9Q92806 393 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 USP13Q92995 863 aaPredicted RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 TRIM31Q9BZY9 425 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CTDSP1Q9GZU7 261 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 ISCUQ9H1K1 167 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 ZDHHC7Q9NXF8 308 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 MYO6Q9UM54 1294 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 TNFSF13BQ9Y275 285 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 RRP7AQ9Y3A4 280 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CLDN16Q9Y5I7 305 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 INSL5Q9Y5Q6 135 aa4.78□□□□□ -1.64
PRPF40A-205ENST00000467114 CYSRT1A8MQ03 144 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms